Reviews & Analysis

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  • The interplay between DNA and its associated proteins has a crucial role in regulating gene expression and determining cellular identity. Here we revisit an earlier Nature Cell Biology study that established the chromatin signature associated with pluripotency.

    • Nathalie Beaujean
    News & Views
  • The different compartments of the mammary stem cell hierarchy develop into distinct breast cancer subtypes as a result of specific genetic lesions. A recent study identifies aberrant ERBB3low luminal progenitors with altered proteostasis and translation as the cell of origin of BRCA2-mutant breast cancer.

    • Jiahui Xu
    • Suling Liu
    News & Views
  • β-adrenergic signalling induces thermogenesis in mature brown adipocytes through a well-known cAMP–protein kinase A (PKA) pathway and also promotes the growth and differentiation of new thermogenic adipocytes. A study now demonstrates that β-adrenergic agonists drive this pathway through a PKA-independent mechanism involving cAMP–EPAC1.

    • Evan D. Rosen
    News & Views
  • tRNA transcriptome composition and regulation are poorly understood. A study reports tRNA transcriptome reprogramming during human cell differentiation, where the abundance of individual tRNA gene transcripts is drastically changed, but each pool of tRNAs containing the same anticodon remains stable.

    • Yichen Hou
    • Tao Pan
    News & Views
  • The transcriptional coactivators TAZ and YAP pair with transcriptional enhanced associate domains (TEADs) to regulate transcription. TAZ and YAP nuclear condensates ensure optimal transcription. A new study reports that FUS regulates TAZ condensates by maintaining them in a fluid state to drive transcription of target genes.

    • Wanjin Hong
    News & Views
  • Different gut microbial metabolites have the potential to promote and protect against colorectal cancer (CRC). A study now links trans-3-indoleacrylic acid (IDA), a metabolite derived from Peptostreptococcus anaerobius, with colorectal carcinogenesis through a distinct ferroptosis pathway AHR–ALDH1A3–FSP1–CoQ10.

    • Qiming Zhang
    • Swagata Goswami
    • Omer Yilmaz
    News & Views
  • The structures and functions of organelles are highly interdependent. Using paired 3D electron microscopy and multi-omics, a study now shows how other organelles affect mitochondrial structure and function: peroxisome-derived lipids reverse mitochondrial stress, highlighting the importance of organelle interconnectivity.

    • Antentor Hinton Jr.
    • Andrea G. Marshall
    News & Views
  • Lineage plasticity and epigenetic changes underlie prostate development and cancer evolution. A new study shows that basal and luminal prostate cells have distinct metabolic profiles, with a basal-to-luminal shift intensifying pyruvate oxidation. Metabolic changes in turn influence chromatin architecture, lineage reprogramming and treatment sensitivity.

    • Martin K. Bakht
    • Himisha Beltran
    News & Views
  • There is increasing interest in approaches that target and eliminate senescent cells. A study reports that the coatomer complex I (COPI) pathway is important for the survival of senescent cells, and suggests that targeting this pathway could hold therapeutic promise in the context of senescence-associated diseases.

    • Stella Victorelli
    • João F. Passos
    News & Views
  • The main barriers for intracellular receptors to sense circulating pathogen-associated molecular patterns (PAMPs) is how these PAMPs enter the cells. A study reveals that extracellular vesicles (EVs) bind lipopolysaccharide (LPS) via the lipid bilayer and mediates LPS intracellular transfer in a CD14-dependent endocytosis to activate noncanonical NLRP3 inflammasome and pyroptosis.

    • Yi Huang
    • Rongbin Zhou
    News & Views
  • Cells use diverse mechanisms to rid themselves of dysfunctional or excess mitochondria. A study now shows that C. elegans sperm use a previously undescribed mechanism to rapidly expel single healthy mitochondria in membrane-bound structures called mitophers.

    • Diane C. Shakes
    News & Views
  • YTHDF family members are ‘readers’ of a common mRNA modification, but their effects on mRNA translation and stability have been disputed. A new study shows that YTHDF1 and YTHDF3 are post-translationally regulated through O-GlcNAcylation, unifying disparate results and pointing to environmental cues that could modulate YTHDF function.

    • Mary W. N. Burns
    • Jennifer J. Kohler
    News & Views
  • How spatial organization in the cell is achieved on the organelle scale is unclear. A new study finds that tethering specific proteins near the surface of micelle-like paraspeckles modifies their properties and determines whether these subnuclear organelles are separate from, adhere to, or are engulfed by nuclear speckles.

    • Jeremy D. Schmit
    • Miroslav Dundr
    News & Views
  • The bacterial pathogen Legionella pneumophila uses effectors — toxins — to facilitate pathogenesis within host cells. A recent study identifies dual mechanisms of the effector SidI as an inhibitor of translation elongation. The N-terminal domain mimics tRNA, whereas the C-terminal domain glycosylates the ribosome.

    • Saori Uematsu
    • Shu-Bing Qian
    News & Views
  • Disruption of ribosome assembly results in the accumulation of aggregation-prone ‘orphaned’ ribosomal proteins that are toxic to cells if left unchecked. A study finds that cells store such ribosomal proteins during heat shock to enable a quick recovery of ribosome assembly after the removal of this stress.

    • Joshua J. Black
    • Rachel Green
    News & Views
  • Bone marrow endothelial cells deliver oxygen and nutrients and regulate bone formation and haematopoiesis in the surrounding microenvironment. A new study identifies a subtype of capillary that occurs exclusively in the epiphysis and displays unique characteristics that have a role in balancing osteogenesis and haematopoiesis.

    • David Redmond
    • Shahin Rafii
    News & Views
  • ESCRT-III seals holes in the nuclear envelope (NE). A study now shows that the Cmp7-directed ESCRT-III cascade that grommets and reseals NE holes after spindle pole body (SPB) extrusion at the end of fission yeast mitosis is complemented by the presence of a proteinaceous diffusion barrier to ensure NE integrity.

    • Hiral Shah
    • Gautam Dey
    News & Views
  • The molecular program of human germline commitment remains largely unknown. A new study delineates the multifaceted functions of DMRT1 in human germline development, particularly in the transition from early to late primordial germ cells.

    • Yongjie Lu
    • Peng Yuan
    • Jie Qiao
    News & Views
  • RNA modifications have emerged as key gene regulators. A new study shows that increased levels of reactive oxygen species in cancer induce widespread, sequence-specific modifications of guanines in the seed regions of microRNAs, altering the targets of those miRNAs and influencing tumorigenesis.

    • Marta Montes
    • Maite Huarte
    News & Views
  • Embryonic diapause in development and paused pluripotency in embryonic stem cells result in a state of hypotranscription through mechanisms that remain unclear. A new study dissects the role of METTL3-deposited global m6A RNA methylation in mediating this transcriptional dormancy.

    • Xueting Xu
    • Baoming Qin
    News & Views