Abstract
The cell nucleus is enveloped by a complex membrane, whose wrinkling has been implicated in disease and cellular aging. The biophysical dynamics and spectral evolution of nuclear wrinkling during multicellular development remain poorly understood due to a lack of direct quantitative measurements. Here we characterize the onset and dynamics of nuclear wrinkling during egg development in the fruit fly when nurse cell nuclei increase in size and display stereotypical wrinkling behaviour. A spectral analysis of three-dimensional high-resolution live-imaging data from several hundred nuclei reveals a robust asymptotic power-law scaling of angular fluctuations consistent with renormalization and scaling predictions from a nonlinear elastic shell model. We further demonstrate that nuclear wrinkling can be reversed through osmotic shock and suppressed by microtubule disruption, providing tunable physical and biological control parameters for probing the mechanical properties of the nuclear envelope. Our findings advance the biophysical understanding of nuclear membrane fluctuations during early multicellular development.
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Data availability
All data supporting the findings of this work are available within the paper and its Supplementary Information. Higher-resolution images, point cloud data, spherical harmonic processing codes and spreadsheets containing the experimental data points shown in the plots are available via Figshare at https://doi.org/10.6084/m9.figshare.23800287. Due to file-size limitations, the raw microscopy data are available from the corresponding authors upon request.
Code availability
The code used for numerical simulations is publicly available via GitHub at https://github.com/NicoRomeo/d3shell.
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Acknowledgements
We thank the MIT SuperCloud and Lincoln Laboratory Supercomputing Center for providing high-performance computing resources that have contributed to the research results reported in this paper. We thank M. Kardar, R. D. Kamm, E. Folker, M. A. Collins and D. P. Holmes for helpful discussions. This work was supported by a MathWorks Science Fellowship (N.R.), NSF Award DMS-1952706 (J.D. and N.R.), Sloan Foundation Grant G-2021-16758 (J.D.), MIT Mathematics Robert E. Collins Distinguished Scholar Fund (J.D.), Feodor Lynen Research Fellowship from the Humboldt Foundation (J.F.T.), Jarve Fund MIT grant (A.C.M. and J.D.) and the National Institute of General Medical Sciences of the National Institutes of Health under award no. R01GM144115 (A.C.M). N.R. and J.F.T. acknowledge participation in the KITP online workshop ‘The Physics of Elastic Films: from Biological Membranes to Extreme Mechanics’ supported in part by the National Science Foundation under grant no. NSF PHY-1748958.
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J.I.A., J.A.J., N.R., J.F.T., J.D. and A.C.M. conceived the project. J.I.A. and J.A.J. designed and conducted the experiments. N.R., K.J.B. and J.F.T. designed and implemented the numerical simulations. N.R. and A.M. performed the analytical calculations. J.A.J. and N.R. performed the image and data analyses. N.R., J.A.J., J.I.A. and J.D. wrote the original paper, with input from all authors. All authors revised the paper.
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Supplementary information
Supplementary Information
Supplementary Figs. 1–12 and Table 1.
Supplementary Video 1
Three z stacks of the Nup107 signal through individual nurse cell nuclei from egg chambers of time proxies 118, 157 and 216 (from left to right), showing the progression of NE shapes from unwrinkled (left) to heavily wrinkled (right) during development. Scale bar, 5 μm; 10 fps.
Supplementary Video 2
Two time-lapse images of the MIPs of two nurse cell nuclei each from egg chambers expressing Nup107::GFP, showing fluctuations in NE wrinkling over time. The first video shows a lower-resolution video acquired at 1 frame per 40 s (time proxy 160). The second video shows a higher-resolution video acquired at 1 frame every 5 min (time proxy 200). Scale bar, 10 μm; 10 fps; the second video has each frame duplicated four times for an effective rate of 2 fps.
Supplementary Video 3
The z stack through an egg chamber (time proxy 166) expressing Nup107::GFP (green) and stained with SPY555-tubulin to visualize the microtubules (magenta). The white box highlights a region corresponding to the zoomed-in z stack in the latter part of the video. Microtubules are present around the nurse cell nuclei, but their locations do not seem to correlate with the locations of NE wrinkles. The orange arrows point to surface fluctuations without a nearby tubulin signal; the white arrow, to surface fluctuations with a nearby tubulin signal; and the cyan arrow, to a tubulin signal near the undeformed surface. Scale bar, 20 μm; 15 fps.
Supplementary Video 4
Egg chamber (time proxy 172) expressing Nup107::GFP before and after the addition of 9 mg ml–1 colchicine to disrupt the microtubules. After drug addition, nurse cell’s NE wrinkles markedly decrease in amplitude over the next 30 min. This effect is not simply due to the addition of a fresh medium (Supplementary Video 5). The white box in the second and third frames indicates the rough border of the zoomed-in image shown for the rest of the video. Scale bar, 20 μm; 5 fps.
Supplementary Video 5
Egg chamber (time proxy 163) expressing Nup107::GFP before and after the addition of a fresh, identical culture medium, used as a control for colchicine addition. After medium addition, the NE wrinkles show no major change. The white box in the second and third frames indicates the rough border of the zoomed-in image shown for the rest of the video. Scale bar, 20 μm; 5 fps.
Supplementary Video 6
Two time-lapse images showing single optical sections from NEs (Nup107, green), cell membranes (magenta) and the motion of cytoplasmic components (reflected light, grey) in the egg chambers under normal conditions (no inhibitors added). The first time lapse is from an egg chamber of time proxy 190; the second is of time proxy 173. Scale bar, 20 μm; 30 fps.
Supplementary Video 7
Three reflection microscopy time-lapse images showing the effects of colchicine addition on intracellular motion. First time lapse: MIP through 4 μm near the top of a nucleus in one nurse cell; the NE appears as a large, bright object deforming and rotating alongside fluctuations of small objects in the cytoplasm (white dots). Alternating dark and light regions on the right side of the NE are fluctuating wrinkles. Second time lapse: projection through 8 μm of the same egg chamber after the addition of 9 mg ml–1 colchicine. The boxed nucleus corresponds to the nucleus shown in the first portion of the video. A reduction in NE roughness can be seen by the reduction in the linear patterns of the dark and light regions. Reduction in cytoplasmic motion becomes more easily apparent at around 10 min. Third time lapse: projection through 6.5 μm of a nucleus from a different egg chamber, more than 30 min after colchicine was added, to ensure that the slowing in the second time lapse did not result from photodamage. Here, too, the NE is smoother than expected given the egg chamber age, and small cytoplasmic objects are substantially less mobile. Scale bar, 10 μm; 20 fps.
Supplementary Video 8
Egg chamber (time proxy 178) expressing Nup107::GFP before and after the addition of 10 μg ml–1 cytochalasin D to disrupt F-actin. After drug addition, nurse cell’s NE wrinkles show no substantial change. The addition of DMSO alone also causes no major change (Supplementary Video 9). The white box in the second and third frames indicates the rough border of the zoomed-in image shown for the rest of the video. Scale bar, 20 μm; 5 fps.
Supplementary Video 9
Egg chamber (time proxy 170) expressing Nup107::GFP before and after the addition of DMSO, used as a control for cytochalasin D addition. After DMSO addition, the NE wrinkles show no major change. The white box in the second and third frames indicates the rough border of the zoomed-in image shown for the rest of the video. Scale bar, 20 μm; 5 fps.
Supplementary Video 10
Three z stacks through individual nurse cell nuclei (Supplementary Video 1) from egg chambers of time proxy 118, 157 and 216 (from left to right). The Nup107 signal is shown in grey following the background subtraction and Gaussian blur used to preprocess before segmentation; the segmentation output is shown in red. The rightmost nucleus is near the oldest of the nuclei segmented and hence effectively represents a lower bound on the accuracy achieved for segmentations used in reconstructions. Scale bar, 5 μm; 10 fps.
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Jackson, J.A., Romeo, N., Mietke, A. et al. Scaling behaviour and control of nuclear wrinkling. Nat. Phys. 19, 1927–1935 (2023). https://doi.org/10.1038/s41567-023-02216-y
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DOI: https://doi.org/10.1038/s41567-023-02216-y