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| Open AccessPredicting DNA Methylation State of CpG Dinucleotide Using Genome Topological Features and Deep Networks
- Yiheng Wang
- , Tong Liu
- & Zheng Wang
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| Open AccessThe recent ancestry of Middle East respiratory syndrome coronavirus in Korea has been shaped by recombination
- Jin Il Kim
- , You-Jin Kim
- & Man-Seong Park
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| Open AccessSystematic comparison of variant calling pipelines using gold standard personal exome variants
- Sohyun Hwang
- , Eiru Kim
- & Edward M. Marcotte
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| Open AccessExploring molecular variation in Schistosoma japonicum in China
- Neil D. Young
- , Kok-Gan Chan
- & Robin B. Gasser
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| Open AccessRed clover (Trifolium pratense L.) draft genome provides a platform for trait improvement
- Jose J. De Vega
- , Sarah Ayling
- & Leif Skøt
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| Open AccessRevisiting the reference genomes of human pathogenic Cryptosporidium species: reannotation of C. parvum Iowa and a new C. hominis reference
- Juan P. Isaza
- , Ana Luz Galván
- & Juan F. Alzate
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| Open AccessLeveraging long read sequencing from a single individual to provide a comprehensive resource for benchmarking variant calling methods
- John C. Mu
- , Pegah Tootoonchi Afshar
- & Hugo Y. K. Lam
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| Open AccessIdentification and analysis of the N6-methyladenosine in the Saccharomyces cerevisiae transcriptome
- Wei Chen
- , Hong Tran
- & Liqing Zhang
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| Open AccessEvaluation of drug-targetable genes by defining modes of abnormality in gene expression
- Junseong Park
- , Jungsul Lee
- & Chulhee Choi
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| Open AccessCultivating the uncultured: growing the recalcitrant cluster-2 Frankia strains
- Maher Gtari
- , Faten Ghodhbane-Gtari
- & Abdellatif Boudabous
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| Open AccessReduction of butyrate- and methane-producing microorganisms in patients with Irritable Bowel Syndrome
- Marta Pozuelo
- , Suchita Panda
- & Chaysavanh Manichanh
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| Open AccessPerformance comparison of four commercial human whole-exome capture platforms
- Daichi Shigemizu
- , Yukihide Momozawa
- & Tatsuhiko Tsunoda
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| Open AccessAnalysis of IS6110 insertion sites provide a glimpse into genome evolution of Mycobacterium tuberculosis
- Tanmoy Roychowdhury
- , Saurav Mandal
- & Alok Bhattacharya
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Article
| Open AccessAncestry, admixture and fitness in Colombian genomes
- Lavanya Rishishwar
- , Andrew B. Conley
- & I. King Jordan
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| Open AccessRNA editing differently affects protein-coding genes in D. melanogaster and H. sapiens
- Luigi Grassi
- , Guido Leoni
- & Anna Tramontano
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| Open AccessDifferential and coherent processing patterns from small RNAs
- Sachin Pundhir
- & Jan Gorodkin
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| Open AccessAncient DNA sequence revealed by error-correcting codes
- Marcelo M. Brandão
- , Larissa Spoladore
- & Reginaldo Palazzo
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| Open AccessMeta-genomic analysis of toilet waste from long distance flights; a step towards global surveillance of infectious diseases and antimicrobial resistance
- Thomas Nordahl Petersen
- , Simon Rasmussen
- & Frank M. Aarestrup
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| Open AccessGDC 2: Compression of large collections of genomes
- Sebastian Deorowicz
- , Agnieszka Danek
- & Marcin Niemiec
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| Open AccessA Statistical Framework to Predict Functional Non-Coding Regions in the Human Genome Through Integrated Analysis of Annotation Data
- Qiongshi Lu
- , Yiming Hu
- & Hongyu Zhao
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| Open AccessA novel DNA sequence motif in human and mouse genomes
- Shilu Zhang
- , Fang Du
- & Hongkai Ji
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Article
| Open AccessMetazoans evolved by taking domains from soluble proteins to expand intercellular communication network
- Hyun-Jun Nam
- , Inhae Kim
- & Sanguk Kim
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Article
| Open AccessCompleting bacterial genome assemblies: strategy and performance comparisons
- Yu-Chieh Liao
- , Shu-Hung Lin
- & Hsin-Hung Lin
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| Open AccessComplete genome sequence of hypervirulent and outbreak-associated Acinetobacter baumannii strain LAC-4: epidemiology, resistance genetic determinants and potential virulence factors
- Hong-Yu Ou
- , Shan N. Kuang
- & H. Howard Xu
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| Open AccessqPMS9: An Efficient Algorithm for Quorum Planted Motif Search
- Marius Nicolae
- & Sanguthevar Rajasekaran
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| Open AccessFurther Improvements to Linear Mixed Models for Genome-Wide Association Studies
- Christian Widmer
- , Christoph Lippert
- & David Heckerman
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| Open AccessImproved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs
- Matthew Scholz
- , Chien-Chi Lo
- & Patrick S. G. Chain
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| Open AccessUsing RNA-seq and targeted nucleases to identify mechanisms of drug resistance in acute myeloid leukemia
- Susan K. Rathe
- , Branden S. Moriarity
- & David A. Largaespada
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| Open AccessSingle cell genome analysis of an uncultured heterotrophic stramenopile
- Rajat S. Roy
- , Dana C. Price
- & Debashish Bhattacharya
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| Open AccessA near complete snapshot of the Zea mays seedling transcriptome revealed from ultra-deep sequencing
- Jeffrey A. Martin
- , Nicole V. Johnson
- & Zhong Wang
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| Open AccessIdentification of phenotype deterministic genes using systemic analysis of transcriptional response
- Jungsul Lee
- , Junseong Park
- & Chulhee Choi
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| Open AccessExploration of miRNA families for hypotheses generation
- Timothy K. K. Kamanu
- , Aleksandar Radovanovic
- & Vladimir B. Bajic
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| Open AccessEmpirical validation of viral quasispecies assembly algorithms: state-of-the-art and challenges
- Mattia C. F. Prosperi
- , Li Yin
- & Marco Salemi
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| Open AccessNext-Generation Anchor Based Phylogeny (NexABP): Constructing phylogeny from Next-generation sequencing data
- Tanmoy Roychowdhury
- , Anchal Vishnoi
- & Alok Bhattacharya
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| Open AccessMolecular evolution of human adenoviruses
- Christopher M. Robinson
- , Gurdeep Singh
- & James Chodosh
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| Open AccessThe benefits of selecting phenotype-specific variants for applications of mixed models in genomics
- Christoph Lippert
- , Gerald Quon
- & David Heckerman
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| Open AccessRNA sequencing of cancer reveals novel splicing alterations
- Jeyanthy Eswaran
- , Anelia Horvath
- & Rakesh Kumar