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Comparative transcriptomic and physiological analyses unravel wheat source root adaptation to phosphorous deficiency
- Daozhen Luo
- , Muhammad Usman
- & Dengfeng Dong
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Global transcriptome profiles provide insights into muscle cell development and differentiation on microstructured marine biopolymer scaffolds for cultured meat production
- Dragica Bezjak
- , Nicole Orellana
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The transcription factor STE12 influences growth on several carbon sources and production of dehydroacetic acid (DHAA) in Trichoderma reesei
- Miriam Schalamun
- , Wolfgang Hinterdobler
- & Monika Schmoll
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Uncovering the molecular mechanisms of russet skin formation in Niagara grapevine (Vitis vinifera × Vitis labrusca)
- Guilherme Francio Niederauer
- , Geovani Luciano de Oliveira
- & Anete Pereira de Souza
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Enriched atlas of lncRNA and protein-coding genes for the GRCg7b chicken assembly and its functional annotation across 47 tissues
- Fabien Degalez
- , Mathieu Charles
- & Sandrine Lagarrigue
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Cacao pod transcriptome profiling of seven genotypes identifies features associated with post-penetration resistance to Phytophthora palmivora
- Indrani K. Baruah
- , Jonathan Shao
- & Stephen P. Cohen
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Inflammation drives pathogenesis of early intestinal failure-associated liver disease
- Scott C. Fligor
- , Savas T. Tsikis
- & Mark Puder
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Real-time evaluation of signal accuracy in wastewater surveillance of pathogens with high rates of mutation
- Ocean Thakali
- , Élisabeth Mercier
- & Eli Zeeb
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Technical optimization of spatially resolved single-cell transcriptomic datasets to study clinical liver disease
- Brittany Rocque
- , Kate Guion
- & Juliet A. Emamaullee
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Transcriptomic characterization of the human segmental endotoxin challenge model
- Christina Gress
- , Tobias Litzenburger
- & Jens M. Hohlfeld
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Molecular detection of Citrus exocortis viroid (CEVd), Citrus viroid-III (CVd-III), and Citrus viroid-IV (CVd-IV) in Palestine
- Aswar Abualrob
- , Osama Alabdallah
- & Raed Alkowni
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dTrmt10A impacts Hsp70 chaperone m6A levels and the stress response in the Drosophila brain
- Alexandra E. Perlegos
- , Xiuming Quan
- & Nancy M. Bonini
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Identification of differences in CD4+ T-cell gene expression between people with asthma and healthy controls
- Mauro Tutino
- , Jenny Hankinson
- & John A. Curtin
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Transcriptional profiles of pulmonary artery endothelial cells in pulmonary hypertension
- Navneet Singh
- , Carsten Eickhoff
- & Corey E. Ventetuolo
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Ambiguous genes due to aligners and their impact on RNA-seq data analysis
- Alicja Szabelska-Beresewicz
- , Joanna Zyprych-Walczak
- & Michał Okoniewski
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Characterization of the genomic alterations in poorly differentiated thyroid cancer
- Yeeun Lee
- , SeongRyeol Moon
- & Yoo Seung Chung
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Molecular mechanisms of NMDA excitotoxicity in the retina
- Galina Dvoriantchikova
- , Michelle Fleishaker
- & Dmitry Ivanov
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Integrated transcriptomic and proteomic analyses reveal the mechanism of easy acceptance of artificial pelleted diets during food habit domestication in Largemouth bass (Micropterus salmoides)
- Jinxing Du
- , Jiaqi Shao
- & Yingkun Cen
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Starvation induces changes in abundance and small RNA cargo of extracellular vesicles released from Plasmodium falciparum infected red blood cells
- Leonie Vetter
- , Amanj Bajalan
- & Ulf Ribacke
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Time-series analysis of transcriptomic changes due to permethrin exposure reveals that Aedes aegypti undergoes detoxification metabolism over 24 h
- Lindsey K. Mack
- & Geoffrey M. Attardo
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Multi-breed host rumen epithelium transcriptome and microbiome associations and their relationship with beef cattle feed efficiency
- P. A. S. Fonseca
- , S. Lam
- & A. Cánovas
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The acquisition order of leukemic drug resistance mutations is directed by the selective fitness associated with each resistance mechanism
- Benjamin C. S. Leow
- , Chung H. Kok
- & Laura N. Eadie
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Multi-omic analyses of triptan-treated migraine attacks gives insight into molecular mechanisms
- Lisette J. A. Kogelman
- , Katrine Falkenberg
- & Thomas Folkmann Hansen
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Novel methods of immunogenic antigen selection for serological diagnosis of Parelaphostrongylus tenuis infection
- Jessie Richards
- , Stephen Kania
- & Richard Gerhold
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Gene expression in bumble bee larvae differs qualitatively between high and low concentration imidacloprid exposure levels
- Rubén Martín-Blázquez
- , Austin C. Calhoun
- & Sydney A. Cameron
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Tumor-educated platelet blood tests for Non-Small Cell Lung Cancer detection and management
- Mafalda Antunes-Ferreira
- , Silvia D’Ambrosi
- & Thomas Wurdinger
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Dengue virus infection during window period of consecutive outbreaks in Nepal and assessment of clinical parameters
- Ramanuj Rauniyar
- , Sabita Prajapati
- & Krishna Das Manandhar
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Next-generation RNA sequencing elucidates transcriptomic signatures of pathophysiologic nerve regeneration
- Wesley S. Warner
- , Christopher Stubben
- & Mark A. Mahan
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Rapid TCR:Epitope Ranker (RAPTER): a primary human T cell reactivity screening assay pairing epitope and TCR at single cell resolution
- Raquel P. Deering
- , Lili Blumenberg
- & Gavin Thurston
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Small RNA transcriptome analysis using parallel single-cell small RNA sequencing
- Jia Li
- , Zhirong Zhang
- & Tao Cai
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Low-grade glioma risk SNP rs11706832 is associated with type I interferon response pathway genes in cell lines
- Adam Rosenbaum
- , Anna M. Dahlin
- & Beatrice Melin
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Effect of distance measures on confidences of t-SNE embeddings and its implications on clustering for scRNA-seq data
- Busra Ozgode Yigin
- & Gorkem Saygili
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Genome-wide transcriptional profiling provides clues to molecular mechanisms underlying cold tolerance in chickpea
- Alireza Akbari
- , Ahmad Ismaili
- & Zahra-Sadat Shobbar
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Transcriptomic data meta-analysis reveals common and injury model specific gene expression changes in the regenerating zebrafish heart
- Marius Alexandru Botos
- , Prateek Arora
- & Nadia Mercader
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Transcriptome and physiological analyses reveal new insights into delayed incompatibility formed by interspecific grafting
- Qiao Liu
- , Xiurong Wang
- & Yao Yang
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Transcriptomic analysis of the cerebral hippocampal tissue in spontaneously hypertensive rats exposed to acute hypobaric hypoxia: associations with inflammation and energy metabolism
- Wei Chang
- , Jinxiu Cui
- & Junhui Xue
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Transcriptome profiling for precision cancer medicine using shallow nanopore cDNA sequencing
- Andreas Mock
- , Melissa Braun
- & Cihan Erkut
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Hepatitis C and HIV detection by blood RNA-sequencing in cohort of smokers
- Jarrett D. Morrow
- , Peter J. Castaldi
- & Craig P. Hersh
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An optimized method for high-quality RNA extraction from distinctive intrinsic laryngeal muscles in the rat model
- Angela M. Kemfack
- , Ignacio Hernandez-Morato
- & Michael J. Pitman
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Titration of 124 antibodies using CITE-Seq on human PBMCs
- Felix Sebastian Nettersheim
- , Sujit Silas Armstrong
- & Klaus Ley
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Integrated taxonomy reveals new threatened freshwater mussels (Bivalvia: Hyriidae: Westralunio) from southwestern Australia
- Michael W. Klunzinger
- , Corey Whisson
- & Lisa Kirkendale
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Combination of long-read and short-read sequencing provides comprehensive transcriptome and new insight for Chrysanthemum morifolium ray-floret colorization
- Mitsuko Kishi-Kaboshi
- , Tsuyoshi Tanaka
- & Ryutaro Aida
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Utility of fatty acid profile and in vitro immune cell activation for chemical and biological standardization of Arthrospira/Limnospira
- Jungmoo Huh
- , Jin Zhang
- & Nirmal D. Pugh
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Semibulk RNA-seq analysis as a convenient method for measuring gene expression statuses in a local cellular environment
- Kyoko Muto
- , Issei Tsuchiya
- & Masahide Seki
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A resource for integrated genomic analysis of the human liver
- Yi-Hui Zhou
- , Paul J. Gallins
- & Federico Innocenti
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SARS-CoV-2 genome variations and evolution patterns in Egypt: a multi-center study
- Deena Jalal
- , Mariam G. Elzayat
- & Ahmed A. Sayed
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PTPRD and CNTNAP2 as markers of tumor aggressiveness in oligodendrogliomas
- Kirsi J. Rautajoki
- , Serafiina Jaatinen
- & Matti Nykter
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| Open Access
Nanopore metatranscriptomics reveals cryptic catfish species as potential Shigella flexneri vectors in Kenya
- Andrew J. Tighe
- , Sean Grayson
- & Jens Carlsson
STEAP2 promotes hepatocellular carcinoma progression via increased copper levels and stress-activated MAP kinase activity
Variability in donor leukocyte counts confound the use of common RNA sequencing data normalization strategies in transcriptomic biomarker studies performed with whole blood