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Self-enhanced mobility enables vortex pattern formation in living matter
We demonstrate that self-enhanced mobility offers a simple physical mechanism for pattern formation in living systems and, more generally, in other active matter systems near the boundary of fluid- and solid-like behaviours.
- Haoran Xu
- & Yilin Wu
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Article |
The structure and physical properties of a packaged bacteriophage particle
Multiresolution computational simulations generate all-atom models of a complete packaged virus particle.
- Kush Coshic
- , Christopher Maffeo
- & Aleksei Aksimentiev
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Article
| Open AccessNeural signal propagation atlas of Caenorhabditis elegans
Measurements of signal propagation in more than 23,000 pairs of neurons from nematode worms show that predictions of neural function made on the basis of anatomy are often incorrect, in part owing to the effects of extrasynaptic signalling.
- Francesco Randi
- , Anuj K. Sharma
- & Andrew M. Leifer
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Article
| Open AccessAssembly theory explains and quantifies selection and evolution
Assembly theory conceptualizes objects as entities defined by their possible formation histories, allowing a unified language for describing selection, evolution and the generation of novelty.
- Abhishek Sharma
- , Dániel Czégel
- & Leroy Cronin
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Article
| Open AccessBridging two insect flight modes in evolution, physiology and robophysics
Asynchronous flight in all major groups of insects likely arose from a single common ancestor with reversions to a synchronous flight mode enabled by shifts back and forth between different regimes in the same set of dynamic parameters.
- Jeff Gau
- , James Lynch
- & Simon Sponberg
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Article |
Extreme dynamics in a biomolecular condensate
Two highly charged disordered human proteins phase-separate into viscous complex coacervates while retaining their rapid conformational dynamics through pico- to nanosecond exchange of short-lived side-chain interactions.
- Nicola Galvanetto
- , Miloš T. Ivanović
- & Benjamin Schuler
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Article |
Hydration solids
A study shows that water can control macroscopic properties of biological materials through the hydration force, giving rise to a distinct class of solid matter with unusual properties.
- Steven G. Harrellson
- , Michael S. DeLay
- & Ozgur Sahin
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Article |
Photosynthesis re-wired on the pico-second timescale
By using in vivo ultrafast TA spectroscopy, extraction of electrons directly from photoexcited PSI and PSII in cyanobacterial cells using exogenous electron mediators is demonstrated.
- Tomi K. Baikie
- , Laura T. Wey
- & Jenny Z. Zhang
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Article
| Open AccessAn electric molecular motor
An electrically driven motor on the molecular scale based on [3]catenane is described, in which two cyclobis(paraquat-p-phenylene) rings operate by means of redox reactions, demonstrating highly unidirectional movement around a circular loop.
- Long Zhang
- , Yunyan Qiu
- & J. Fraser Stoddart
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Article |
Odour motion sensing enhances navigation of complex plumes
Odour motion contains valuable directional information that is absent from the airflow alone, and Drosophila use this directional information to shape their navigational decisions.
- Nirag Kadakia
- , Mahmut Demir
- & Thierry Emonet
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Article
| Open AccessA DNA origami rotary ratchet motor
A nanoscale rotary motor made of DNA origami, driven by ratcheting and powered by an external electric field, shows the ability to wind up a spring and has mechanical capabilities approaching those of biological motors.
- Anna-Katharina Pumm
- , Wouter Engelen
- & Hendrik Dietz
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Article |
Odd dynamics of living chiral crystals
Experiments show that swimming starfish embryos spontaneously assemble into large chiral crystals that exhibit self-sustained chiral oscillations and unconventional deformation responses characteristic of odd elastic materials.
- Tzer Han Tan
- , Alexander Mietke
- & Nikta Fakhri
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Article |
Engineered jumpers overcome biological limits via work multiplication
A comparison of the energetics of jumping between biological and engineered systems shows that engineered systems can greatly increase energy limits using the process of work multiplication, and this analysis leads to the demonstration of a 30-centimetre device jumping over 30 metres.
- Elliot W. Hawkes
- , Charles Xiao
- & Günter Niemeyer
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Article
| Open AccessNovel flight style and light wings boost flight performance of tiny beetles
Three-dimensional reconstructions of morphology and flight mechanics of the beetle Paratuposa placentis reveal adaptations that enable extremely small insects to fly at speeds similar to those of much larger insects.
- Sergey E. Farisenkov
- , Dmitry Kolomenskiy
- & Alexey A. Polilov
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Article |
Viscoelastic control of spatiotemporal order in bacterial active matter
Introducing viscoelasticity by addition of DNA into the fluid surrounding a suspension of Escherichia coli produces a giant oscillating vortex with a period controllable through the DNA concentration.
- Song Liu
- , Suraj Shankar
- & Yilin Wu
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Article |
Wetting regulates autophagy of phase-separated compartments and the cytosol
A theoretical model, in vitro reconstitution and in vivo experimentation show that competition between droplet surface tension and membrane sheet instability dictates the form and function of autophagosomal membranes.
- Jaime Agudo-Canalejo
- , Sebastian W. Schultz
- & Roland L. Knorr
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Article |
Control of osteoblast regeneration by a train of Erk activity waves
The rate of scale regeneration in zebrafish is controlled by the frequency of rhythmic travelling waves of Erk activity, which are broadcast from a central source to induce ring-like patterns of osteoblast tissue growth.
- Alessandro De Simone
- , Maya N. Evanitsky
- & Stefano Di Talia
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Article |
The architecture of the Gram-positive bacterial cell wall
Using high-resolution atomic force microscopy of live cells, the authors present an updated view of the cell walls of both Staphylococcus aureus and Bacillus subtilis.
- L. Pasquina-Lemonche
- , J. Burns
- & J. K. Hobbs
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Article |
Loopy Lévy flights enhance tracer diffusion in active suspensions
A theoretical framework describing the hydrodynamic interactions between a passive particle and an active medium in out-of-equilibrium systems predicts long-range Lévy flights for the diffusing particle driven by the density of the active component.
- Kiyoshi Kanazawa
- , Tomohiko G. Sano
- & Adrian Baule
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Article |
Stiffness of the human foot and evolution of the transverse arch
The transverse tarsal arch, acting through the inter-metatarsal tissues, is important for the longitudinal stiffness of the foot and its appearance is a key step in the evolution of human bipedalism.
- Madhusudhan Venkadesan
- , Ali Yawar
- & Shreyas Mandre
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Article |
Bacterial coexistence driven by motility and spatial competition
In mixed bacterial populations that colonize nutrient patches, a growth–migration trade-off can lead to spatial exclusion that provides an advantage to populations that become rare, thereby stabilizing the community.
- Sebastian Gude
- , Erçağ Pinçe
- & Sander J. Tans
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Letter |
Emergence of tissue-like mechanics from fibrous networks confined by close-packed cells
Tissue rheology emerges from the interplay between fibrous networks and cell inclusions, and the mechanical properties of tissues are modulated by restricting the relaxation modes of fibres close to volume-conserving cells.
- Anne S. G. van Oosten
- , Xingyu Chen
- & Paul A. Janmey
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Letter |
Controlling organization and forces in active matter through optically defined boundaries
Light is used to guide the behaviour of an engineered active-matter system, producing structures and properties that can be dynamically manipulated and controlled.
- Tyler D. Ross
- , Heun Jin Lee
- & Matt Thomson
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Letter |
Collective intercellular communication through ultra-fast hydrodynamic trigger waves
Ultra-fast hydrodynamic communication between cells emerges in colonies of Spirostomum ambiguum through the generation of long-ranged vortex flows that are sensed by neighbouring cells, leading to propagating trigger waves that coordinate the release of toxins.
- Arnold J. T. M. Mathijssen
- , Joshua Culver
- & Manu Prakash
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Letter |
Heterochromatin drives compartmentalization of inverted and conventional nuclei
Attractions between heterochromatic regions are essential for phase separation of the active and inactive genome in inverted and conventional nuclei, whereas chromatin–lamina interactions are necessary to build the conventional genomic architecture from these segregated phases.
- Martin Falk
- , Yana Feodorova
- & Leonid A. Mirny
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Letter |
Attachment of the blastoderm to the vitelline envelope affects gastrulation of insects
In the red flour beetle (Tribolium castaneum) and fruit fly (Drosophila melanogaster), spatiotemporally coordinated integrin-dependent attachments between the blastoderm and vitelline envelope counteract tissue-intrinsic contractile forces to create asymmetric movements of embryonic tissue.
- Stefan Münster
- , Akanksha Jain
- & Pavel Tomancak
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Article |
Active superelasticity in three-dimensional epithelia of controlled shape
Theoretical modelling in combination with measurements of tension and shape in epithelial domes of controlled geometry reveals a plateau of tension in tissue that is maintained by heterogeneous strain across cells.
- Ernest Latorre
- , Sohan Kale
- & Xavier Trepat
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Letter |
Molecular nucleation mechanisms and control strategies for crystal polymorph selection
Cryo-transmission electron microscopy reveals the initiation of glucose isomerase crystals and their growth into different crystalline or gel polymorphs, and shows that mutating specific amino acids controls which polymorph grows.
- Alexander E. S. Van Driessche
- , Nani Van Gerven
- & Mike Sleutel
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Article |
Extreme disorder in an ultrahigh-affinity protein complex
A high-affinity complex of histone H1 and prothymosin-α reveals an unexpected interaction mechanism, where the large opposite net charge enables the two proteins to remain highly disordered even in the complex.
- Alessandro Borgia
- , Madeleine B. Borgia
- & Benjamin Schuler
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Letter |
Electromechanical vortex filaments during cardiac fibrillation
Using optical mapping and 3D ultrasound, the dynamics and interactions between electrical and mechanical phase singularities were analysed by simultaneously measuring the membrane potential, intracellular calcium concentration and mechanical contractions of the heart during normal rhythm and fibrillation.
- J. Christoph
- , M. Chebbok
- & S. Luther
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Letter |
Inertial picobalance reveals fast mass fluctuations in mammalian cells
A picobalance consisting of an optically excited microcantilever has been developed and used to measure the masses of individual healthy and virus-infected cells at high temporal and mass resolutions in culture conditions.
- David Martínez-Martín
- , Gotthold Fläschner
- & Daniel J. Müller
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Analysis |
Ribosomes are optimized for autocatalytic production
The large number of small, similarly sized proteins and the small number of heavy RNA molecules that make up a ribosome reduce the time required for reproduction.
- Shlomi Reuveni
- , Måns Ehrenberg
- & Johan Paulsson
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Article |
A living mesoscopic cellular automaton made of skin scales
A mesoscopic cellular automaton arising from a microscopic reaction–diffusion system as a function of skin thickness is observed in ocellated lizards, showing that cellular automata are not merely abstract computational systems, but can directly correspond to processes generated by biological evolution.
- Liana Manukyan
- , Sophie A. Montandon
- & Michel C. Milinkovitch
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Letter |
Topological defects control collective dynamics in neural progenitor cell cultures
The cell flow and defects within the alignment pattern of cultured mouse neural progenitor cells are described.
- Kyogo Kawaguchi
- , Ryoichiro Kageyama
- & Masaki Sano
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Letter |
Weak synchronization and large-scale collective oscillation in dense bacterial suspensions
Cells in dense bacterial suspensions can self-organize into highly robust collective oscillatory motion, while individual cells move in an erratic manner; their interaction is modelled to reveal a weak synchronization mechanism.
- Chong Chen
- , Song Liu
- & Yilin Wu
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Letter |
Alternative modes of client binding enable functional plasticity of Hsp70
Hsp70 binds unfolded protein segments in its groove, but can also bind and stabilize folded protein structures, owing to its moveable lid, with ATP hydrolysis and co-chaperones allowing control of these contrasting effects.
- Alireza Mashaghi
- , Sergey Bezrukavnikov
- & Sander J. Tans
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Letter |
Continuous directional water transport on the peristome surface of Nepenthes alata
Insects are captured by the carnivorous plant Nepenthes alata when they ‘aquaplane’ on the wet rim, or ‘peristome’, of the plant’s pitcher organ; here it is shown that unidirectional water flow is crucial to the complete wetting of the peristome, and that the underlying mechanism involves multiscale structural features.
- Huawei Chen
- , Pengfei Zhang
- & Lei Jiang
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Letter |
Macromolecular diffractive imaging using imperfect crystals
Crystal lattice disorder, which gives rise to a continuous diffraction pattern, is exploited to determine the structure of the integral membrane protein complex photosystem II to a higher resolution than could be achieved using Bragg diffraction alone.
- Kartik Ayyer
- , Oleksandr M. Yefanov
- & Henry N. Chapman
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Letter |
Anthropogenic electromagnetic noise disrupts magnetic compass orientation in a migratory bird
For the first time under reproducible and fully double-blinded conditions, it is shown that anthropogenic electromagnetic noise below the WHO limits affects a biological system: night-migrating birds lose the ability to use the Earth’s magnetic field for orientation when exposed to anthropogenic electromagnetic noise at strengths routinely produced by commonly used electronic devices.
- Svenja Engels
- , Nils-Lasse Schneider
- & Henrik Mouritsen
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Letter |
Single-molecule fluorescence probes dynamics of barrier crossing
Here the Kramers diffusion coefficient and free-energy barrier are characterized for the first time through single-molecule fluorescence measurements of the temperature- and viscosity-dependence of the transition path time for protein folding.
- Hoi Sung Chung
- & William A. Eaton
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Letter |
Elastic energy storage in the shoulder and the evolution of high-speed throwing in Homo
Humans are able to throw projectiles with high speed and accuracy largely as a result of anatomical features that enable elastic energy storage and release at the shoulder; features that first appear together approximately 2 million years ago in Homo erectus, possibly as a means to hunt.
- Neil T. Roach
- , Madhusudhan Venkadesan
- & Daniel E. Lieberman
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News & Views |
Spontaneous flows and self-propelled drops
The construction of in vitro assemblies of biological components that exhibit properties of living matter may shed light on the physical aspects of the dynamic reorganization that continuously occurs inside cells. See Letter p.431
- M. Cristina Marchetti
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Research Highlights |
Viruses as power generators
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News & Views |
Spotlight on mobility
The complexity in patterns of human mobility, migration and communication has been difficult to unpack. Researchers have now come up with a simple theory that captures the intricacy of such phenomena. See Letter p.96
- Dirk Brockmann
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Letter |
Tail-assisted pitch control in lizards, robots and dinosaurs
Comparison of real lizards with a robotic version and a dinosaur model shows that lizards use their tails to control body pitch in aerial motion by means of transfer of angular momentum from the body to the tail.
- Thomas Libby
- , Talia Y. Moore
- & Robert J. Full
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News & Views |
Filaments band together
Theoretical models of the dynamics of self-driven systems predict the collective motion of biological systems, such as insect swarms. An experimental model has been developed to test the predictions.
- Jean-François Joanny
- & Sriram Ramaswamy