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COMPUTATIONAL BIOLOGY

Exploring a world of a thousand dimensions

Nature Biotechnology volume 37, pages 1423–1424 (2019)Cite this article

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PHATE enhances the visualization of high-dimensional data.

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Fig. 1: Uncovering biological structure in scRNA-seq data.

References

  1. van der Maaten, L. & Hinton, G. J. Mach. Learn. Res. 9, 2579–2605 (2008).

    Google Scholar 

  2. Moon, K. et al. Nat. Biotechnol. https://doi.org/10.1038/s41587-019-0336-3 (2019).

    Article  Google Scholar 

  3. Haghverdi, L., Buettner, F. & Theis, F. J. Bioinformatics 31, 2989–2998 (2015).

    Article  CAS  Google Scholar 

  4. Zappia, L., Phipson, B. & Oshlack, A. PLoS Comput. Biol. 14, e1006245 (2018).

    Article  Google Scholar 

  5. Vallejos, C. A., Risso, D., Scialdone, A., Dudoit, S. & Marioni, J. C. Nat. Methods 14, 565–571 (2017).

    Article  CAS  Google Scholar 

  6. Townes, F.W., Hicks, S.C., Aryee, M.J. & Irizarry, R.A. Preprint at bioRxiv, https://doi.org/10.1101/574574 (2019).

  7. Dumitrascu, B., Villar, S., Mixon, D.G. & Engelhardt, B.E. Preprint at bioRxiv, https://doi.org/10.1101/599654 (2019).

  8. Weber, L. M. et al. Genome Biol. 20, 125 (2019).

    Article  Google Scholar 

  9. Tian, L. et al. Nat. Methods 16, 479–487 (2019).

    Article  CAS  Google Scholar 

Download references

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Authors and Affiliations

  1. MRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK

    Catalina A. Vallejos

  2. The Alan Turing Institute, London, UK

    Catalina A. Vallejos

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  1. Catalina A. Vallejos
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Correspondence to Catalina A. Vallejos.

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Vallejos, C.A. Exploring a world of a thousand dimensions. Nat Biotechnol 37, 1423–1424 (2019). https://doi.org/10.1038/s41587-019-0330-9

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