We developed OxoScan-MS, a mass spectrometric acquisition technology for high-throughput quantification of glycopeptides. When applied to plasma of patients with COVID-19, OxoScan-MS revealed differential glycosylation in disease-relevant proteins. This approach offers potential for large-scale applications, moving beyond traditional protein abundance measurements to explore glycosylated protein biomarkers.
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References
Anderson, N. L. & Anderson, N. G. The human plasma proteome: history, character, and diagnostic prospects. Mol. Cell. Proteomics 1, 845–867 (2002). A review article that discusses the human plasma proteome.
Aebersold, R. & Mann, M. Mass-spectrometric exploration of proteome structure and function. Nature 537, 347–355 (2016). A review article that discusses how mass spectrometry can be used to study structure and function of proteins.
Bagdonaite, I. et al. Glycoproteomics. Nat. Rev. Methods Primers 2, 48 (2022). A review article that discusses methods to study the glycoproteome.
Messner, C. B. et al. Ultra-fast proteomics with Scanning SWATH. Nat. Biotechnol. 39, 846–854 (2021). This paper reports the Scanning SWATH technology used for the OxoScan Method.
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This is a summary of: White, M. E. H. et al. Oxonium ion scanning mass spectrometry for large-scale plasma glycoproteomics. Nat. Biomed. Eng. https://doi.org/10.1038/s41551-023-01067-5 (2023).
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A high-throughput workflow for comprehensive glycopeptide mapping. Nat. Biomed. Eng 8, 212–213 (2024). https://doi.org/10.1038/s41551-023-01068-4
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DOI: https://doi.org/10.1038/s41551-023-01068-4