Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • News & Views
  • Published:

CUT it out: silencing of noise in the transcriptome

Eukaryotic transcriptomes are considerably larger than estimated from simple gene counts. However, much of this 'excess' RNA is immediately cleared from cells. Two recent studies reveal that so-called cryptic unstable transcripts constitutively transcribed from the yeast genome are rapidly eliminated in a process that couples transcription termination to RNA degradation.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1: Processing and degradation of 3′ ends of three different RNAPII transcripts.

Ebbe Sloth Andersen

References

  1. Willingham, A.T. & Gingeras, T.R. Cell 125, 1215–1220 (2006).

    Article  CAS  Google Scholar 

  2. Wyers, F. et al. Cell 121, 725–737 (2005).

    Article  CAS  Google Scholar 

  3. Davis, C.A. & Ares, M. Jr . Proc. Natl. Acad. Sci. USA 103, 3262–3267 (2006).

    Article  CAS  Google Scholar 

  4. Arigo, J.T., Eyler, D.E., Carroll, K.L. & Corden, J.L. Mol. Cell 24, 841–851 (2006).

    Article  Google Scholar 

  5. Thiebaut, M., Kisseleva-Romanova, E., Rougemaille, M., Boulay, J. & Libri, D. Mol. Cell 24, 853–864 (2006).

    Article  Google Scholar 

  6. Saguez, C., Olesen, J.R. & Jensen, T.H. Curr. Opin. Cell Biol. 17, 287–293 (2005).

    Article  CAS  Google Scholar 

  7. Houseley, J., LaCava, J. & Tollervey, D. Nat. Rev. Mol. Cell Biol. 7, 529–539 (2006).

    Article  CAS  Google Scholar 

  8. LaCava, J. et al. Cell 121, 713–724 (2005).

    Article  CAS  Google Scholar 

  9. Vanacova, S. et al. PLoS Biol. 6, e189 (2005).

    Article  Google Scholar 

  10. Steinmetz, E.J., Conrad, N.K., Brow, D.A. & Corden, J.L. Nature 413, 327–331 (2001).

    Article  CAS  Google Scholar 

  11. Arigo, J.T., Carroll, K.L., Ames, J.M. & Corden, J.L. Mol. Cell 21, 641–651 (2006).

    Article  CAS  Google Scholar 

  12. Vasiljeva, L. & Buratowski, S. Mol. Cell 21, 239–248 (2006).

    Article  CAS  Google Scholar 

  13. Carroll, K.L., Pradhan, D.A., Granek, J.A., Clarke, N.D. & Corden, J.L. Mol. Cell. Biol. 24, 6241–6252 (2004).

    Article  CAS  Google Scholar 

  14. Steinmetz, E.J. & Brow, D.A. Proc. Natl. Acad. Sci. USA 95, 6699–6704 (1998).

    Article  CAS  Google Scholar 

  15. Martens, J.A., Wu, P.Y. & Winston, F. Genes Dev. 19, 2695–2704 (2005).

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Lykke-Andersen, S., Jensen, T. CUT it out: silencing of noise in the transcriptome. Nat Struct Mol Biol 13, 860–861 (2006). https://doi.org/10.1038/nsmb1006-860

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1038/nsmb1006-860

This article is cited by

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing