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| Open AccessDe novo assembly and characterization of the liver transcriptome of Mugil incilis (lisa) using next generation sequencing
- Angela Bertel-Sevilla
- , Juan F. Alzate
- & Jesus Olivero-Verbel
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| Open AccessThe P-glycoprotein repertoire of the equine parasitic nematode Parascaris univalens
- Alexander P. Gerhard
- , Jürgen Krücken
- & Georg von Samson-Himmelstjerna
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| Open AccessComplete genome sequences of Streptococcus pyogenes type strain reveal 100%-match between PacBio-solo and Illumina-Oxford Nanopore hybrid assemblies
- Francisco Salvà-Serra
- , Daniel Jaén-Luchoro
- & Edward R. B. Moore
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| Open AccessA compendium of genome-wide sequence reads from NBS (nucleotide binding site) domains of resistance genes in the common potato
- Celine Prakash
- , Friederike Ch Trognitz
- & Bodo Trognitz
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| Open AccessBrain transcriptomics of agonistic behaviour in the weakly electric fish Gymnotus omarorum, a wild teleost model of non-breeding aggression
- Guillermo Eastman
- , Guillermo Valiño
- & Ana Silva
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| Open AccessWhole-genome sequencing provides new insights into genetic mechanisms of tropical adaptation in Nellore (Bos primigenius indicus)
- Gerardo Alves Fernandes Júnior
- , Henrique Nunes de Oliveira
- & Lucia Galvão de Albuquerque
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| Open AccessImmunity to vector saliva is compromised by short sand fly seasons in endemic regions with temperate climates
- Fabiano Oliveira
- , Ekaterina Giorgobiani
- & Shaden Kamhawi
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| Open AccessThe complete mitochondrial genome of the eusocial sponge-dwelling snapping shrimp Synalpheus microneptunus
- Solomon T. C. Chak
- , Phillip Barden
- & J. Antonio Baeza
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| Open AccessCOMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis
- Jiang Li
- , Alvin T. Kho
- & Kelan G. Tantisira
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| Open AccessThe Eupentacta fraudatrix transcriptome provides insights into regulation of cell transdifferentiation
- Alexey V. Boyko
- , Alexander S. Girich
- & Igor Yu. Dolmatov
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| Open AccessThe Discovery of Twenty-Eight New Encapsulin Sequences, Including Three in Anammox Bacteria
- John C. Tracey
- , Maricela Coronado
- & Bess B. Ward
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| Open AccessNNTox: Gene Ontology-Based Protein Toxicity Prediction Using Neural Network
- Aashish Jain
- & Daisuke Kihara
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| Open AccessParticle Mobility Analysis Using Deep Learning and the Moment Scaling Spectrum
- Marloes Arts
- , Ihor Smal
- & Erik Meijering
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| Open AccessExploring the limitations of biophysical propensity scales coupled with machine learning for protein sequence analysis
- Daniele Raimondi
- , Gabriele Orlando
- & Yves Moreau
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| Open AccessIntegrated Counts of Carbohydrate-Active Protein Domains as Metabolic Readouts to Distinguish Probiotic Biology and Human Fecal Metagenomes
- Hong-Hsing Liu
- , Yu-Chen Lin
- & Pi-Feng Chang
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| Open AccessGeneration of a Comprehensive Transcriptome Atlas and Transcriptome Dynamics in Medicinal Cannabis
- Shivraj Braich
- , Rebecca C. Baillie
- & Noel O. I. Cogan
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| Open AccessNew insights on Pseudoalteromonas haloplanktis TAC125 genome organization and benchmarks of genome assembly applications using next and third generation sequencing technologies
- Weihong Qi
- , Andrea Colarusso
- & Macarena Toll-Riera
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| Open AccessN-GlyDE: a two-stage N-linked glycosylation site prediction incorporating gapped dipeptides and pattern-based encoding
- Thejkiran Pitti
- , Ching-Tai Chen
- & Ting-Yi Sung
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| Open AccessStructural and phylogenetic implications of the complete mitochondrial genome of Ledra auditura
- Jia-Jia Wang
- , De-Fang Li
- & Ren-Huai Dai
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| Open AccessDe novo transcriptome of Gymnema sylvestre identified putative lncRNA and genes regulating terpenoid biosynthesis pathway
- Garima Ayachit
- , Inayatullah Shaikh
- & Jayashankar Das
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| Open AccessOverlapping protein-coding genes in human genome and their coincidental expression in tissues
- Chao-Hsin Chen
- , Chao-Yu Pan
- & Wen-chang Lin
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| Open AccessReal-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria
- Harrison S. Edwards
- , Raga Krishnakumar
- & Michael S. Bartsch
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| Open AccessPACES: prediction of N4-acetylcytidine (ac4C) modification sites in mRNA
- Wanqing Zhao
- , Yiran Zhou
- & Yuan Zhou
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| Open AccessDEEPred: Automated Protein Function Prediction with Multi-task Feed-forward Deep Neural Networks
- Ahmet Sureyya Rifaioglu
- , Tunca Doğan
- & Volkan Atalay
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| Open AccessPiPred – a deep-learning method for prediction of π-helices in protein sequences
- Jan Ludwiczak
- , Aleksander Winski
- & Stanislaw Dunin-Horkawicz
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| Open AccessNanopore sequencing reads improve assembly and gene annotation of the Parochlus steinenii genome
- Seung Chul Shin
- , Hyun Kim
- & Sanghee Kim
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| Open AccessExtensive conservation of the proneuropeptide and peptide prohormone complement in mollusks
- A. L. De Oliveira
- , A. Calcino
- & A. Wanninger
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| Open AccessmiRNA analysis with Prost! reveals evolutionary conservation of organ-enriched expression and post-transcriptional modifications in three-spined stickleback and zebrafish
- Thomas Desvignes
- , Peter Batzel
- & John H. Postlethwait
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| Open AccessA genome-wide map of circular RNAs in adult zebrafish
- Disha Sharma
- , Paras Sehgal
- & Sridhar Sivasubbu
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| Open AccessProbabilistic variable-length segmentation of protein sequences for discriminative motif discovery (DiMotif) and sequence embedding (ProtVecX)
- Ehsaneddin Asgari
- , Alice C. McHardy
- & Mohammad R. K. Mofrad
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| Open AccessComprehensive sequencing of the myocilin gene in a selected cohort of severe primary open-angle glaucoma patients
- Luke O’Gorman
- , Angela J. Cree
- & Jane Gibson
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| Open AccessMolecular evidence for distinct modes of nutrient acquisition between visceral and neurotropic schistosomes of birds
- Roman Leontovyč
- , Neil D. Young
- & Petr Horák
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| Open AccessImage-based promoter prediction: a promoter prediction method based on evolutionarily generated patterns
- Sheng Wang
- , Xuesong Cheng
- & Yuhua Zhao
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| Open AccessLarge-scale in-silico statistical mutagenesis analysis sheds light on the deleteriousness landscape of the human proteome
- Daniele Raimondi
- , Gabriele Orlando
- & Wim F. Vranken
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| Open AccessGenome Features and Biochemical Characteristics of a Robust, Fast Growing and Naturally Transformable Cyanobacterium Synechococcus elongatus PCC 11801 Isolated from India
- Damini Jaiswal
- , Annesha Sengupta
- & Pramod P. Wangikar
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| Open AccessRNA sequencing and de novo assembly of Solanum trilobatum leaf transcriptome to identify putative transcripts for major metabolic pathways
- Adil Lateef
- , Sudheesh K. Prabhudas
- & Purushothaman Natarajan
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| Open AccessCharacterisation and functional predictions of canine long non-coding RNAs
- Céline Le Béguec
- , Valentin Wucher
- & Christophe Hitte
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| Open AccessMolecular, physiological and phylogenetic traits of Lactococcus 936-type phages from distinct dairy environments
- M. Chmielewska-Jeznach
- , J. K. Bardowski
- & A. K. Szczepankowska
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| Open AccessThe landscape of the A-to-I RNA editome from 462 human genomes
- Zhangyi Ouyang
- , Chao Ren
- & Wenjie Shu
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| Open AccessPhosContext2vec: a distributed representation of residue-level sequence contexts and its application to general and kinase-specific phosphorylation site prediction
- Ying Xu
- , Jiangning Song
- & James C. Whisstock
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| Open AccessAn improved assembly and annotation of the melon (Cucumis melo L.) reference genome
- Valentino Ruggieri
- , Konstantinos G. Alexiou
- & Jordi Garcia-Mas
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| Open AccessComputational identification and validation of alternative splicing in ZSF1 rat RNA-seq data, a preclinical model for type 2 diabetic nephropathy
- Chi Zhang
- , Ken Dower
- & Shanrong Zhao
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| Open AccessImproved strategy for the curation and classification of kinases, with broad applicability to other eukaryotic protein groups
- Andreas J. Stroehlein
- , Neil D. Young
- & Robin B. Gasser
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| Open AccessAccurate identification of RNA editing sites from primitive sequence with deep neural networks
- Zhangyi Ouyang
- , Feng Liu
- & Wenjie Shu
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| Open AccessNovel and Haplotype Specific MicroRNAs Encoded by the Major Histocompatibility Complex
- P. M. Clark
- , N. Chitnis
- & D. Monos
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| Open AccessMethylation in Mycobacterium tuberculosis is lineage specific with associated mutations present globally
- Jody Phelan
- , Paola Florez de Sessions
- & Taane G. Clark
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| Open AccessIdentification and characterization of serine protease inhibitors in a parasitic wasp, Pteromalus puparum
- Lei Yang
- , Yaotian Mei
- & Gongyin Ye
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| Open AccessThe rises and falls of opsin genes in 59 ray-finned fish genomes and their implications for environmental adaptation
- Jinn-Jy Lin
- , Feng-Yu Wang
- & Tzi-Yuan Wang
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| Open AccessSomatic mutation driven codon transition bias in human cancer
- Hyeonju Son
- , Hyundeok Kang
- & Sangwoo Kim