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| Open AccessCuration, inference, and assessment of a globally reconstructed gene regulatory network for Streptomyces coelicolor
- Andrea Zorro-Aranda
- , Juan Miguel Escorcia-Rodríguez
- & Julio Augusto Freyre-González
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Article
| Open AccessModeling the metabolic profile of Mytilus edulis reveals molecular signatures linked to gonadal development, sex and environmental site
- Jaanika Kronberg
- , Jonathan J. Byrne
- & Francesco Falciani
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Article
| Open AccessTopological clustering of regulatory genes confers pathogenic tolerance to cassava brown streak virus (CBSV) in cassava
- Thanakorn Jaemthaworn
- , Saowalak Kalapanulak
- & Treenut Saithong
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Article
| Open AccessMicrobiome-Transcriptome Interactions Related to Severity of Respiratory Syncytial Virus Infection
- Abhijeet R. Sonawane
- , Liang Tian
- & Yang-Yu Liu
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| Open AccessNovel computational model of gastrula morphogenesis to identify spatial discriminator genes by self-organizing map (SOM) clustering
- Tomoya Mori
- , Haruka Takaoka
- & Wataru Fujibuchi
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Article
| Open AccessImpact of measurement noise, experimental design, and estimation methods on Modular Response Analysis based network reconstruction
- Caterina Thomaseth
- , Dirk Fey
- & Boris N. Kholodenko
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Article
| Open AccessFitting mathematical models of biochemical pathways to steady state perturbation response data without simulating perturbation experiments
- Tapesh Santra
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Article
| Open AccessAltitude control in honeybees: joint vision-based learning and guidance
- Geoffrey Portelli
- , Julien R. Serres
- & Franck Ruffier
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Article
| Open AccessEnlightening discriminative network functional modules behind Principal Component Analysis separation in differential-omic science studies
- Sara Ciucci
- , Yan Ge
- & Carlo Vittorio Cannistraci
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| Open AccessNetDiff – Bayesian model selection for differential gene regulatory network inference
- Thomas Thorne
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Article
| Open AccessKnowledge-guided fuzzy logic modeling to infer cellular signaling networks from proteomic data
- Hui Liu
- , Fan Zhang
- & Jie Zheng
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Article
| Open AccessNetwork Modeling Identifies Patient-specific Pathways in Glioblastoma
- Nurcan Tuncbag
- , Pamela Milani
- & Ernest Fraenkel
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Article
| Open AccessGene regulatory network inference using fused LASSO on multiple data sets
- Nooshin Omranian
- , Jeanne M. O. Eloundou-Mbebi
- & Zoran Nikoloski
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Article
| Open AccessLong-term strain improvements accumulate mutations in regulatory elements responsible for hyper-production of cellulolytic enzymes
- Guodong Liu
- , Lei Zhang
- & Yinbo Qu