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| Open AccessCharacterization of a putative orexin receptor in Ciona intestinalis sheds light on the evolution of the orexin/hypocretin system in chordates
- Maiju K. Rinne
- , Lauri Urvas
- & Henri Xhaard
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Article
| Open AccessLoss-of-function mutations are main drivers of adaptations during short-term evolution
- Joanna Klim
- , Urszula Zielenkiewicz
- & Szymon Kaczanowski
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Article
| Open AccessOxytoxaceae are prorocentralean rather than peridinialean dinophytes and taxonomic clarification of heterotrophic Oxytoxum lohmannii (≡ “Amphidinium” crassum) by epitypification
- Marc Gottschling
- , Stephan Wietkamp
- & Urban Tillmann
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| Open AccessComparative analysis of chloroplast and mitochondrial genomes of sweet potato provides evidence of gene transfer
- GuoLiang Li
- , Hong Zhang
- & Hao Tang
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Matters Arising
| Open AccessEmbracing the taxonomic and topological stability of phylogenomics
- Nicolás Mongiardino Koch
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| Open AccessA new HaCV-EBHSV recombinant lagovirus circulating in European brown hares (Lepus europaeus) from Catalonia, Spain
- Tereza Almeida
- , Ana M. Lopes
- & Joana Abrantes
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| Open AccessA multidisciplinary approach to tackling invasive species: barcoding, morphology, and metataxonomy of the leafhopper Arboridia adanae
- Riccardo Piccinno
- , Alessia Tatti
- & Omar Rota-Stabelli
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| Open AccessA phased genome assembly of a Colombian Trypanosoma cruzi TcI strain and the evolution of gene families
- Maria Camila Hoyos Sanchez
- , Hader Sebastian Ospina Zapata
- & Jorge Duitama
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| Open AccessA transposon-based genetic marker for conspecific identity within the Bactrocera dorsalis species complex
- Grazyna J. Zimowska
- , Nirmala Xavier
- & Alfred M. Handler
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| Open AccessEvolution of a plant sex chromosome driven by expanding pericentromeric recombination suppression
- Dmitry A. Filatov
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| Open AccessComparative genomics of monotremes provides insights into the early evolution of mammalian epidermal differentiation genes
- Julia Steinbinder
- , Attila Placido Sachslehner
- & Leopold Eckhart
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Article
| Open AccessStrong selection signatures for Aleutian disease tolerance acting on novel candidate genes linked to immune and cellular responses in American mink (Neogale vison)
- Seyed Milad Vahedi
- , Siavash Salek Ardestani
- & K. Fraser Clark
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| Open AccessGenetic analyses reveal panmixia in Indian waters and population subdivision across Indian Ocean and Indo-Malay Archipelago for Decapterus russelli
- Anjaly Jose
- , Sandhya Sukumaran
- & A. Gopalakrishnan
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| Open AccessEvolution of the Araliaceae family involved rapid diversification of the Asian Palmate group and Hydrocotyle specific mutational pressure
- Jong-Soo Kang
- , Vo Ngoc Linh Giang
- & Tae-Jin Yang
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| Open AccessGenome-wide characterization and evolutionary analysis of the AP2/ERF gene family in lettuce (Lactuca sativa)
- Sunchung Park
- , Ainong Shi
- & Beiquan Mou
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Article
| Open AccessMolecular epidemiology, clinical analysis, and genetic characterization of Zika virus infections in Thailand (2020–2023)
- Sarawut Khongwichit
- , Watchaporn Chuchaona
- & Yong Poovorawan
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| Open AccessComplete mitochondrial genome analyses confirm that bat Polychromophilus and ungulate Plasmodium constitute a distinct clade independent of other Plasmodium species
- Juthathip Poofery
- , Thongchai Ngamprasertwong
- & Morakot Kaewthamasorn
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Article
| Open AccessTrio-binning of a hinny refines the comparative organization of the horse and donkey X chromosomes and reveals novel species-specific features
- Matthew J. Jevit
- , Caitlin Castaneda
- & Terje Raudsepp
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Article
| Open AccessConstruction of Streptomyces coelicolor A3(2) mutants that exclusively produce NA4/NA6 intermediates of agarose metabolism through mutation induction
- Jina Kim
- , Eun Joo Kim
- & Woori Kwak
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Article
| Open AccessThe blackcap (Sylvia atricapilla) genome reveals a recent accumulation of LTR retrotransposons
- Andrea Bours
- , Peter Pruisscher
- & Miriam Liedvogel
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| Open AccessEffect of recombination on genetic diversity of Caenorhabditis elegans
- Ho-Yon Hwang
- & Jiou Wang
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| Open AccessA decade of human metapneumovirus in hospitalized children with acute respiratory infection: molecular epidemiology in central Vietnam, 2007–2017
- Hirono Otomaru
- , Hien Anh Thi Nguyen
- & Lay-Myint Yoshida
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| Open AccessMycobacterium tuberculosis β-lactamase variant reduces sensitivity to ampicillin/avibactam in a zebrafish-Mycobacterium marinum model of tuberculosis
- Ilona van Alen
- , Mayra A. Aguirre García
- & Marcellus Ubbink
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| Open AccessTracing the birth of structural domains from loops during protein evolution
- M. Fayez Aziz
- , Fizza Mughal
- & Gustavo Caetano-Anollés
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| Open AccessUltra-deep sequencing of 45S rDNA to discern intragenomic diversity in three Chrysodeixis species for molecular identification
- Frida A. Zink
- , Luke R. Tembrock
- & Todd M. Gilligan
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| Open AccessComparative chloroplast genomics and insights into the molecular evolution of Tanaecium (Bignonieae, Bignoniaceae)
- Annelise Frazão
- , Verônica A. Thode
- & Lúcia G. Lohmann
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| Open AccessAmino acid positions near the active site determine the reduced activity of human ACOD1 compared to murine ACOD1
- Fangfang Chen
- , Israfil Yalcin
- & Konrad Büssow
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| Open AccessEvolution of NLR genes in genus Arachis reveals asymmetric expansion of NLRome in wild and domesticated tetraploid species
- Muhammad Rizwan
- , Syed Zeeshan Haider
- & Saad Serfraz
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| Open AccessPolyproline type II helical antifreeze proteins are widespread in Collembola and likely originated over 400 million years ago in the Ordovician Period
- Connor L. Scholl
- , Martin Holmstrup
- & Peter L. Davies
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Article
| Open AccessUncertainties surrounding the oldest fossil record of diatoms
- Karolina Bryłka
- , Andrew J. Alverson
- & Daniel J. Conley
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| Open AccessIndel driven rapid evolution of core nuclear pore protein gene promoters
- David W. J. McQuarrie
- , Adam M. Read
- & Matthias Soller
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| Open AccessMitogenomic phylogenetic analyses provide novel insights into the taxonomic problems of several hesperiid taxa (Lepidoptera: Hesperiidae)
- Lijuan Zhu
- , Yuke Han
- & Xiaoling Fan
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| Open AccessMito-nuclear discordance within Anthozoa, with notes on unique properties of their mitochondrial genomes
- Andrea M. Quattrini
- , Karen E. Snyder
- & Catherine S. McFadden
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| Open AccessNovel mitochondrial genome rearrangements including duplications and extensive heteroplasmy could underlie temperature adaptations in Antarctic notothenioid fishes
- Bushra Fazal Minhas
- , Emily A. Beck
- & Julian Catchen
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| Open AccessPhylogenomic analysis uncovers a 9-year variation of Uganda influenza type-A strains from the WHO-recommended vaccines and other Africa strains
- Grace Nabakooza
- , D. Collins Owuor
- & Julius J. Lutwama
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| Open AccessGenome-wide identification, expression profile and evolutionary relationships of TPS genes in the neotropical fruit tree species Psidium cattleyanum
- Drielli Canal
- , Frank Lino Guzman Escudero
- & Andreia Carina Turchetto-Zolet
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| Open AccessThe molecular evolution of genes previously associated with large sizes reveals possible pathways to cetacean gigantism
- Felipe André Silva
- , Érica M. S. Souza
- & Mariana F. Nery
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| Open AccessAccumulation of retrotransposons contributes to W chromosome differentiation in the willow beauty Peribatodes rhomboidaria (Lepidoptera: Geometridae)
- Martina Hejníčková
- , Martina Dalíková
- & Eugenia E. Montiel
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| Open AccessA recent view about encephalomyocarditis virus circulating in compartmentalised animal population in Northern Italy
- E. A. Foglia
- , G. Pezzoni
- & E. Brocchi
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| Open AccessA strategy for evaluating potential antiviral resistance to small molecule drugs and application to SARS-CoV-2
- Karen Sargsyan
- , Karine Mazmanian
- & Carmay Lim
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| Open AccessExpanding repertoire of SARS-CoV-2 deletion mutations contributes to evolution of highly transmissible variants
- A. J. Venkatakrishnan
- , Praveen Anand
- & Venky Soundararajan
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| Open AccessGenomic analysis of hypoxia inducible factor alpha in ray-finned fishes reveals missing Ohnologs and evidence of widespread positive selection
- Ian K. Townley
- , Courtney H. Babin
- & Bernard B. Rees
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| Open AccessHybridization and diversity of aquatic macrophyte Sparganium L. (Typhaceae) as revealed by high-throughput nrDNA sequencing
- Evgeny A. Belyakov
- , Yulia V. Mikhaylova
- & Aleksandr V. Rodionov
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| Open AccessNovel selectively amplified DNA sequences in the germline genome of the Japanese hagfish, Eptatretus burgeri
- Kohei Nagao
- , Tomoko Otsuzumi
- & Yuji Goto
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| Open AccessKnockout of ABC transporter gene ABCA2 confers resistance to Bt toxin Cry2Ab in Helicoverpa zea
- Jeffrey A. Fabrick
- , Chan C. Heu
- & Bruce E. Tabashnik
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Article
| Open AccessDifferent skeletal protein toolkits achieve similar structure and performance in the tropical coral Stylophora pistillata and the temperate Oculina patagonica
- Tal Zaquin
- , Anna Paola Di Bisceglie
- & Tali Mass
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Article
| Open AccessPhylogenomic analysis of the bowfin (Amia calva) reveals unrecognized species diversity in a living fossil lineage
- Jeremy J. Wright
- , Spencer A. Bruce
- & Donald J. Stewart
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| Open AccessPhylogeny and evolution of the genus Cervus (Cervidae, Mammalia) as revealed by complete mitochondrial genomes
- Paweł Mackiewicz
- , Maciej Matosiuk
- & Mirosław Ratkiewicz
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| Open AccessMassive annotation of bacterial l-asparaginases reveals their puzzling distribution and frequent gene transfer events
- Andrzej Zielezinski
- , Joanna I. Loch
- & Mariusz Jaskolski