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| Open AccessIdentification of potential microRNA panels for pancreatic cancer diagnosis using microarray datasets and bioinformatics methods
- Roshanak Shams
- , Samaneh Saberi
- & Hamid Asadzadeh Aghdaei
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Article
| Open AccessComprehensive analysis of the SLC16A gene family in pancreatic cancer via integrated bioinformatics
- Shan Yu
- , Yanshuang Wu
- & Sheng Tai
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| Open AccessNBIA: a network-based integrative analysis framework – applied to pathway analysis
- Tin Nguyen
- , Adib Shafi
- & Sorin Draghici
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| Open AccessPrediction of Alzheimer’s disease using blood gene expression data
- Taesic Lee
- & Hyunju Lee
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| Open AccessSubcellular Compartmentalization of Survivin is Associated with Biological Aggressiveness and Prognosis in Prostate Cancer
- Jan K. Hennigs
- , Sarah Minner
- & Friedemann Honecker
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| Open AccessA Protein Interaction Information-based Generative Model for Enhancing Gene Clustering
- Pratik Dutta
- , Sriparna Saha
- & Aviral Kumar
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| Open AccessTranscriptome meta-analysis reveals differences of immune profile between eutopic endometrium from stage I-II and III-IV endometriosis independently of hormonal milieu
- Omero Benedicto Poli-Neto
- , Juliana Meola
- & Daniel Tiezzi
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| Open AccessTranscriptional analysis identifies potential biomarkers and molecular regulators in pneumonia and COPD exacerbation
- Wilhelm Bertrams
- , Kathrin Griss
- & Bernd Schmeck
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| Open AccessFABP4 and MMP9 levels identified as predictive factors for poor prognosis in patients with nonalcoholic fatty liver using data mining approaches and gene expression analysis
- Audrey Coilly
- , Christophe Desterke
- & Franck Chiappini
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| Open AccessAn Efficient hybrid filter-wrapper metaheuristic-based gene selection method for high dimensional datasets
- Jamshid Pirgazi
- , Mohsen Alimoradi
- & Mohammad Hossein Olyaee
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Article
| Open AccessGenomewide Gene-by-Sex Interaction Scans Identify ADGRV1 for Sex Differences in Opioid Dependent African Americans
- Bao-Zhu Yang
- , Hang Zhou
- & Joel Gelernter
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Article
| Open AccessWidespread Sexual Dimorphism in the Transcriptome of Human Airway Epithelium in Response to Smoking
- Chen Xi Yang
- , Henry Shi
- & Ma’en Obeidat
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Article
| Open AccessFunctional and topographic effects on DNA methylation in IDH1/2 mutant cancers
- Ramona Bledea
- , Varshini Vasudevaraja
- & Matija Snuderl
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Article
| Open AccessIntegrative analysis of clinical and bioinformatics databases to identify anticancer properties of digoxin
- Satoshi Yokoyama
- , Yasuhiro Sugimoto
- & Mitsutaka Takada
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Article
| Open AccessAnalysis of microarray right-censored data through fused sliced inverse regression
- Jae Keun Yoo
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Article
| Open AccessDistinct gene expression profiles between primary breast cancers and brain metastases from pair-matched samples
- Takayuki Iwamoto
- , Naoki Niikura
- & Hiroji Iwata
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| Open AccessDifferential gene expression analysis reveals novel genes and pathways in pediatric septic shock patients
- Akram Mohammed
- , Yan Cui
- & Rishikesan Kamaleswaran
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| Open AccessA bioinformatic analysis identifies circadian expression of splicing factors and time-dependent alternative splicing events in the HD-MY-Z cell line
- Nikolai Genov
- , Alireza Basti
- & Angela Relógio
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Article
| Open AccessVirus Genotype-Dependent Transcriptional Alterations in Lipid Metabolism and Inflammation Pathways in the Hepatitis C Virus-infected Liver
- W. M. H. d’Avigdor
- , M. A. Budzinska
- & N. A. Shackel
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Article
| Open AccessTranscriptome profiling-based identification of prognostic subtypes and multi-omics signatures of glioblastoma
- Junseong Park
- , Jin-Kyoung Shim
- & Seok-Gu Kang
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Article
| Open AccessGlomerular expression pattern of long non-coding RNAs in the type 2 diabetes mellitus BTBR mouse model
- Simone Reichelt-Wurm
- , Tobias Wirtz
- & Miriam C. Banas
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Article
| Open AccessThe ion channels and transporters gene expression profile indicates a shift in excitability and metabolisms during malignant progression of Follicular Lymphoma
- Alberto Magi
- , Marika Masselli
- & Annarosa Arcangeli
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Article
| Open AccessTobacco-Related Alterations in Airway Gene Expression are Rapidly Reversed Within Weeks Following Smoking-Cessation
- Kahkeshan Hijazi
- , Bozena Malyszko
- & Avrum Spira
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| Open AccessConserved Transcriptional Signatures in Human and Murine Diabetic Peripheral Neuropathy
- Brett A. McGregor
- , Stephanie Eid
- & Junguk Hur
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Article
| Open AccessIdentification of Novel Genes in Human Airway Epithelial Cells associated with Chronic Obstructive Pulmonary Disease (COPD) using Machine-Based Learning Algorithms
- Shayan Mostafaei
- , Anoshirvan Kazemnejad
- & Mohammad Doroudian
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Article
| Open AccessDoxorubicin induces an extensive transcriptional and metabolic rewiring in yeast cells
- Hilal Taymaz-Nikerel
- , Muhammed Erkan Karabekmez
- & Betül Kırdar
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Article
| Open AccessStrain-specific differences in brain gene expression in a hydrocephalic mouse model with motile cilia dysfunction
- Casey W. McKenzie
- , Claudia C. Preston
- & Lance Lee
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Article
| Open AccessHuman notochordal cell transcriptome unveils potential regulators of cell function in the developing intervertebral disc
- Ricardo Rodrigues-Pinto
- , Lizzy Ward
- & Judith A. Hoyland
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Article
| Open AccessThe Overlap of Lung Tissue Transcriptome of Smoke Exposed Mice with Human Smoking and COPD
- Ma’en Obeidat
- , Anna Dvorkin-Gheva
- & Don D. Sin
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Article
| Open AccessGenetic regulation of disease risk and endometrial gene expression highlights potential target genes for endometriosis and polycystic ovarian syndrome
- Jenny N. Fung
- , Sally Mortlock
- & Grant W. Montgomery
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Article
| Open AccessTranscriptomic Analysis of Hepatic Cells in Multicellular Organotypic Liver Models
- Allison N. Tegge
- , Richard R. Rodrigues
- & Padmavathy Rajagopalan
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Article
| Open AccessTranscriptomics analysis reveals new insights in E171-induced molecular alterations in a mouse model of colon cancer
- Héloïse Proquin
- , Marlon J. Jetten
- & Yolanda I. Chirino
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Article
| Open AccessImproved identification of concordant and discordant gene expression signatures using an updated rank-rank hypergeometric overlap approach
- Kelly M. Cahill
- , Zhiguang Huo
- & Marianne L. Seney
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Article
| Open AccessComparison of multi-lineage differentiation of hiPSCs reveals novel miRNAs that regulate lineage specification
- Lu Li
- , Kai-Kei Miu
- & Wai-Yee Chan
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Article
| Open AccessGlobal analysis of threonine metabolism genes unravel key players in rice to improve the abiotic stress tolerance
- Pandiyan Muthuramalingam
- , Subramanian Radhesh Krishnan
- & Manikandan Ramesh
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| Open AccessValidation of miRNA prognostic power in hepatocellular carcinoma using expression data of independent datasets
- Ádám Nagy
- , András Lánczky
- & Balázs Győrffy
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| Open AccessIntegrated analysis of long noncoding RNA and mRNA expression profile in children with obesity by microarray analysis
- Yuesheng Liu
- , Yuqiang Ji
- & Yanfeng Xiao
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Article
| Open AccessArchetypal transcriptional blocks underpin yeast gene regulation in response to changes in growth conditions
- David Talavera
- , Christopher J. Kershaw
- & Simon J. Hubbard
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Article
| Open AccessCytoglobin affects tumorigenesis and the expression of ulcerative colitis-associated genes under chemically induced colitis in mice
- Mohammad Yassin
- , Hannelouise Kissow
- & Anders Elm Pedersen
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Article
| Open AccessDeviations of the immune cell landscape between healthy liver and hepatocellular carcinoma
- Nataliya Rohr-Udilova
- , Florian Klinglmüller
- & Michael Trauner
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Article
| Open AccessSystem-wide coordinates of higher order functions in host-pathogen environment upon Mycobacterium tuberculosis infection
- P. V. Parvati Sai Arun
- , Sravan Kumar Miryala
- & Sailu Yellaboina
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Article
| Open AccessGlobal transcriptomic analysis suggests carbon dioxide as an environmental stressor in spaceflight: A systems biology GeneLab case study
- Afshin Beheshti
- , Egle Cekanaviciute
- & Sylvain V. Costes
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| Open AccessSystems Analysis of the Liver Transcriptome in Adult Male Zebrafish Exposed to the Plasticizer (2-Ethylhexyl) Phthalate (DEHP)
- Matthew Huff
- , Willian A. da Silveira
- & Gary Hardiman
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| Open AccessIntegrated Analysis of Gene Expression Differences in Twins Discordant for Disease and Binary Phenotypes
- Sivateja Tangirala
- & Chirag J. Patel
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| Open AccessThe Irish DNA Atlas: Revealing Fine-Scale Population Structure and History within Ireland
- Edmund Gilbert
- , Seamus O’Reilly
- & Gianpiero L. Cavalleri
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Article
| Open AccessA fast approach to detect gene–gene synergy
- Pengwei Xing
- , Yuan Chen
- & Zheming Yuan
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| Open AccessQuantifying the relative immune cell activation from whole tissue/organ-derived differentially expressed gene data
- Edward Wijaya
- , Yoshinobu Igarashi
- & Taiki Aoshi
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Article
| Open AccessGenome-wide Target Enrichment-aided Chip Design: a 66 K SNP Chip for Cashmere Goat
- Xian Qiao
- , Rui Su
- & Jinquan Li
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Article
| Open AccessIdentifying the miRNA signature associated with survival time in patients with lung adenocarcinoma using miRNA expression profiles
- Srinivasulu Yerukala Sathipati
- & Shinn-Ying Ho