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Volume 535 Issue 7612, 21 July 2016

A coral reef surrounding a small island in Kimbe Bay, Papua New Guinea. The health of the world’s coral reefs, which provide goods and services for millions of people, is declining. Effective management of these ecosystems requires an understanding of the underlying drivers of reef decline. In a study that spans the gap between ecology and the social sciences, Joshua Cinner and colleagues develop a Bayesian hierarchical model, using data from more than 2,500 reefs worldwide, to predict reef fish biomass based on various socioeconomic drivers and environmental conditions. They identify 15 bright spots � sites where reef biomass is significantly higher than expected. The bright spots are found not only among iconic remote and pristine areas, but also where there are strong sociocultural institutions and high levels of local engagement. On the basis of this analysis, the authors argue for a refocus of coral reef conservation efforts away from locating and protecting remote, pristine sites, towards unlocking potential solutions from sites that have successfully confronted the coral reef crisis. Cover photo by Tane Sinclair-Taylor (t.sinclairtaylor@gmail.com)

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Seven Days

  • Turkey purges all university deans after failed coup; engineered mosquitos show apparent success against dengue; and Romania joins CERN.

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News Feature

  • The soaring popularity of gene editing has made celebrities of the principal investigators who pioneered the field — but their graduate students and postdocs are often overlooked.

    • Heidi Ledford

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Books & Arts

  • Barbara Kiser reviews five of the week's best science picks.

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News & Views

  • The Antarctic Peninsula has been warming for many decades, but an analysis now reveals that it has cooled since the late 1990s. Inspection of the factors involved suggests that this is consistent with natural variability. See Letter p.411

    • Eric J. Steig
    News & Views
  • Organic molecules called coenzymes are central to metabolism, but have also been found to act as components of RNA in bacteria. A study reveals how coenzymes are incorporated into RNA. See Letter p.444

    • Katharina Höfer
    • Andres Jäschke
    News & Views
  • A global study has identified coral reefs with greater fish biomass than would be predicted given human and environmental pressures. These outliers might teach us something about sustainable coral-reef management. See Letter p.416

    • Kristy J. Kroeker
    News & Views
  • Electrons repel each other because they are negatively charged. An experiment now confirms a fifty-year-old theory that electrons can also attract one another as a result of repulsion from other electrons. See Letter p.395

    • Takis Kontos
    News & Views
  • A field study of methane emissions from wetlands reveals that more of the gas escapes through diffusive processes than was thought, mostly at night. Because methane is a greenhouse gas, the findings have implications for global warming.

    • Katey Walter Anthony
    • Sally MacIntyre
    News & Views
  • Two analyses of insulin-producing β-cells reveal differences in what has long been considered a homogeneous population. These differences might reflect changes during maturation or ageing, or distinct cell lineages. See Letter p.430

    • Susan Bonner-Weir
    • Cristina Aguayo-Mazzucato
    News & Views
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Article

  • A high-resolution gene expression atlas of prenatal and postnatal brain development of rhesus monkey charts global transcriptional dynamics in relation to brain maturation, while comparative analysis reveals human-specific gene trajectories; candidate risk genes associated with human neurodevelopmental disorders tend to be co-expressed in disease-specific patterns in the developing monkey neocortex.

    • Trygve E. Bakken
    • Jeremy A. Miller
    • Ed S. Lein
    Article
  • Increased potential for branched-chain amino acid and lipopolysaccharide biosynthesis in the gut microbiome of insulin-resistant individuals suggests that changes in the serum metabolome induced by dysbiosis, and driven by only a handful of species, contribute to the development of diabetes.

    • Helle Krogh Pedersen
    • Valborg Gudmundsdottir
    • Oluf Pedersen
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Letter

  • The widespread rimmed grooves, lineations and elongate craters extending from the Imbrium impact basin on the Moon, termed the Imbrium Sculpture, includes a non-radial component that is used to infer that the Imbrium impactor was the size of a proto-planet—about half the diameter of Vesta.

    • Peter H. Schultz
    • David A. Crawford
    Letter
  • Experimental demonstration of excitonic attraction between two electrons is achieved in quantum devices made from carbon nanotubes, where the interaction between two electrons is reversed from repulsive to attractive owing to their strong Coulomb interaction with another electronic system.

    • A. Hamo
    • A. Benyamini
    • S. Ilani
    Letter
  • The incorporation of large numbers of chemically diverse functional components into microfabricated structures at precise locations is challenging; now the precision placement of DNA origami by directed self-assembly is shown to overcome this problem for the purpose of reliably and controllably coupling molecular emitters to photonic crystal cavities.

    • Ashwin Gopinath
    • Evan Miyazono
    • Paul W. K. Rothemund
    Letter
  • Data from over 2,500 reefs worldwide is used to identify 15 bright spots—sites where reef biomass is significantly higher than expected—and surveys of local experts in these areas suggest that strong sociocultural institutions and high levels of local engagement are among the factors supporting higher fish biomass.

    • Joshua E. Cinner
    • Cindy Huchery
    • David Mouillot
    Letter
  • In the dorsal medial prefrontal cortex, expression of conditioned fear is causally related to the organization of neurons into functional assemblies, defining tight temporal control of this behaviour.

    • Cyril Dejean
    • Julien Courtin
    • Cyril Herry
    Letter
  • Neurotrophic factors produced by enteric glia in response to microbiota and alarmin cues regulate IL-22 production by group 3 innate lymphoid cells in the gut; disruption of this pathway leads to impaired clearance of Citrobacter rodentium and defects in epithelial integrity in a model of intestinal inflammation.

    • Sales Ibiza
    • Bethania García-Cassani
    • Henrique Veiga-Fernandes
    Letter
  • RNA caps other than the 7-methylguanylate modification are generated by a distinct mechanism in which caps are added during, not after, transcription initiation through the use of non-canonical initiating nucleotides by RNA polymerases, a finding which has functional consequences.

    • Jeremy G. Bird
    • Yu Zhang
    • Bryce E. Nickels
    Letter
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Technology Feature

  • Research into ageing requires patience, but a small cadre of scientists is angling to speed up answers by developing the flamboyant, short-lived turquoise killifish as a new model.

    • Amber Dance

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    Technology Feature
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