Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Original Article
  • Published:

Evolution of the beta defensin 2 gene in primates

Abstract

With the aim of further investigating the molecular evolution of beta defensin genes, after having analysed beta defensin 1 (DEFB1) in humans and several nonhuman primate species, we have studied the evolution of the beta defensin 2 gene (DEFB2), which codifies for a peptide with antimicrobial and chemoattractant activity, in humans and 16 primate species. We have found evidence of positive selection during the evolution of orthologous DEFB2 genes at two points on a phylogenetic tree relating these primates: during the divergence of the platyrrhines from the catarrhines and during the divergence of the Cercopithecidae from the Hylobatidae, Great Apes and humans. Furthermore, amino acid variations in Old World Monkeys seem to centre either on residues that are involved in oligomerisation in the human molecule, or that are conserved (40–80%) in beta-defensins in general. It is thus likely that these variations affect the biological function of the molecules and suggest that their synthesis and functional analysis might reveal interesting new information as to their role in innate immunity.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1
Figure 2
Figure 3
Figure 4

Similar content being viewed by others

Accession codes

Accessions

GenBank/EMBL/DDBJ

References

  1. Harder J, Bartels J, Christophers E, Schroder JM . A peptide antibiotic from human skin. Nature 1997; 387: 861.

    Article  CAS  PubMed  Google Scholar 

  2. Harder J, Meyer-Hoffert U, Teran LM et al. Mucoid Pseudomonas aeruginosa, TNF-alpha, and IL-1beta, but not IL-6, induce human beta-defensin-2 in respiratory epithelia. Am J Respir Cell Mol Biol 2000; 22: 714–721.

    Article  CAS  PubMed  Google Scholar 

  3. Hao HN, Zhao J, Lotoczky G, Grever WE, Lyman WD . Induction of human beta-defensin-2 expression in human astrocytes by lipopolysaccharide and cytokines. J Neurochem 2001; 77: 1027–1035.

    Article  CAS  PubMed  Google Scholar 

  4. Liu AY, Destoumieux D, Wong AV et al. Human beta-defensin- 2 production in keratinocytes is regulated by interleukin-1, bacteria, and the state of differentiation. J Invest Dermatol 2002; 118: 275–281.

    Article  CAS  PubMed  Google Scholar 

  5. Singh PK, Jia HP, Wiles K et al. Production of beta-defensins by human airway epithelia. Proc Natl Acad Sci USA 1998; 95: 14961–14966.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Hoover DM, Rajashankar KR, Blumenthal R et al. The structure of human beta-defensin-2 shows evidence of higher order oligomerization. J Biol Chem 2000; 275: 32911–32918.

    Article  CAS  PubMed  Google Scholar 

  7. Yang D, Chertov O, Bykovskaia SN et al. Beta-defensins: linking innate and adaptive immunity through dendritic and T cell CCR6. Science 1999; 286: 525–528.

    Article  CAS  PubMed  Google Scholar 

  8. Tanaka T, Nei M . Positive Darwinian selection observed at the variable-region genes of immunoglobulins. Mol Biol Evol 1989; 6: 447–459.

    CAS  PubMed  Google Scholar 

  9. Hughes AL, Ota T, Nei M . Positive Darwinian selection promotes charge profile diversity in the antigen-binding cleft of class I major-histocompatibility-complex molecules. Mol Biol Evol 1990; 7: 515–524.

    CAS  PubMed  Google Scholar 

  10. Purvis A . A composite estimate of primate phylogeny. Philos Trans R Soc London B Biol Sci 1995; 348: 405–421.

    Article  CAS  PubMed  Google Scholar 

  11. Eisenberg D . Three-dimensional structure of membrane and surface proteins. Annu Rev Biochem 1984; 53: 595–623.

    Article  CAS  PubMed  Google Scholar 

  12. Del Pero M, Boniotto M, Zuccon D et al. Beta-defensin 1 gene variability among non-human primates. Immunogenetics 2002; 53: 907–913.

    Article  CAS  PubMed  Google Scholar 

  13. Bauer F, Schweimer K, Kluver E et al. Structure determination of human and murine beta-defensins reveals structural conservation in the absence of significant sequence similarity. Protein Sci 2001; 10: 2470–2479.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Perez-Canadillas JM, Zaballos A, Gutierrez J et al. NMR solution structure of murine CCL20/MIP-3alpha, a chemokine that specifically chemoattracts immature dendritic cells and lymphocytes through its highly specific interaction with the beta-chemokine receptor CCR6. J Biol Chem 2001; 276: 28372–28379.

    Article  CAS  PubMed  Google Scholar 

  15. Hoover DM, Boulegue C, Yang D et al. The structure of human macrophage inflammatory protein-3alpha /CCL20. Linking antimicrobial and CC chemokine receptor-6-binding activities with human beta-defensins. J Biol Chem 2002; 277: 37647–37654.

    Article  CAS  PubMed  Google Scholar 

  16. Sambrook J, Fritsch EF, Maniatis T . Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press: New York, 1989.

    Google Scholar 

  17. Walsh PS, Metzger DA, Higuchi R . Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material. Biotechniques 1991; 10: 506–513.

    CAS  PubMed  Google Scholar 

  18. Aiyar A . The use of CLUSTAL W and CLUSTAL X for multiple sequence alignment. Methods Mol Biol 2000; 132: 221–241.

    CAS  PubMed  Google Scholar 

  19. Nei M, Gojobori T . Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol 1986; 3: 418–426.

    CAS  PubMed  Google Scholar 

  20. Kumar S, Tamura K, Jakobsen IB, Nei M . MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 2001; 17: 1244–1245.

    Article  CAS  PubMed  Google Scholar 

  21. Zhang J, Rosenberg HF, Nei M . Positive Darwinian selection after gene duplication in primate ribonuclease genes. Proc Natl Acad Sci USA 1998; 95: 3708–3713.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

Download references

Acknowledgements

This research was in part supported by grants from the Italian Ministry of the Universities and Scientific Research (PRIN 2001). N Antcheva is supported by a grant from the EU PANAD project QLRT-2000-00411. The collaboration of J Masters is made possible by the NRF Science Liaison Centre, Pretoria.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to S Crovella.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Boniotto, M., Tossi, A., DelPero, M. et al. Evolution of the beta defensin 2 gene in primates. Genes Immun 4, 251–257 (2003). https://doi.org/10.1038/sj.gene.6363958

Download citation

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/sj.gene.6363958

Keywords

This article is cited by

Search

Quick links