Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Letter
  • Published:

Methylation map of Xenopus laevis ribosomal RNA

Abstract

One of the most enigmatic features of eukaryotic ribosomal RNA is the presence of many methylated nucleotides. The numbers of RNA methyl groups range from approximately 70 per ribosome in yeast1 to over 100 in vertebrates2,3. Here it is shown that the methylated nucleotides in Xenopus laevis rRNA are broadly but non-uniformly distributed. In 18S rRNA 2′-O-methylations are partly concentrated in the 5′ region and base methylations near the 3′ end. In 28S rRNA methyl groups are infrequent in the 5′ region, moderately frequent in the central region and abundant in an 1,100-nucleotide tract near the 3′ end.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Similar content being viewed by others

References

  1. Klootwijk, J. & Planta, R. J. Eur. J. Biochem. 39, 325–333 (1973).

    Article  CAS  Google Scholar 

  2. Maden, B. E. H. & Salim, M. J. molec. Biol. 88, 133–164 (1974).

    Article  CAS  Google Scholar 

  3. Khan, M. S. N., Salim, M. & Maden, B. E. H. Biochem. J. 169, 531–542 (1978).

    Article  CAS  Google Scholar 

  4. Maden, B. E. H. & Reeder, R. H. Nucleic Acids Res. 6, 817–830 (1979).

    Article  CAS  Google Scholar 

  5. Brand, R. C. & Gerbi, S. A. Nucleic Acids Res. 7, 1497–1511 (1979).

    Article  CAS  Google Scholar 

  6. Khan, M. S. N. & Maden, B. E. H. J. molec. Biol. 101, 235–254 (1976).

    Article  CAS  Google Scholar 

  7. Maden, B. E. H. & Khan, M. S. N. Biochem. J. 167, 211–221 (1977).

    Article  CAS  Google Scholar 

  8. Brand, R. C., Klootwijk, J., Van Steenbergen, T. J. M., De Kok, A. J. & Planta, R. J. Eur. J. Biochem. 75, 311–318 (1977).

    Article  CAS  Google Scholar 

  9. Greenberg, M. & Penman, S. J. molec. Biol. 21, 527–535 (1966).

    Article  CAS  Google Scholar 

  10. Brand, R. C., Klootwijk, J., Planta, R. J. & Maden, B. E. H. Biochem. J. 169, 71–77 (1978).

    Article  CAS  Google Scholar 

  11. Hagenbüchle, O., Santer, M., Steitz, J. A. & Mans, R. J. Cell 13, 551–563 (1978).

    Article  Google Scholar 

  12. Choi, Y. C. & Busch, H. Biochem. biophys. Res. Commun. 58, 674–682 (1974).

    Article  CAS  Google Scholar 

  13. Salim, M. & Maden, B. E. H. Nucleic Acids Res. 8, 2871–2884 (1980).

    Article  CAS  Google Scholar 

  14. Gourse, R. L. & Gerbi, S. A. J. molec. Biol. 140, 321–339 (1980).

    Article  CAS  Google Scholar 

  15. Carbon, P., Ehresmann, C., Ehresmann, B. & Ebel, J. P. FEBS Lett. 94, 152–156 (1978).

    Article  CAS  Google Scholar 

  16. Brosius, J., Palmer, M. L., Poindexter, J. K. & Noller, H. F. Proc. natn. Acad. Sci. U.S.A. 75, 4801–4805 (1978).

    Article  CAS  ADS  Google Scholar 

  17. Muto, A., Ehresmann, C., Fellner, P. & Zimmermann, R. A. J. molec. Biol. 86, 411–432 (1976).

    Article  Google Scholar 

  18. Cole, M. D., Beer, M., Koller, Th., Stycharz, W. A. & Nomura, M. Proc. natn. Acad. Sci. U.S.A. 75, 270–274 (1978).

    Article  CAS  ADS  Google Scholar 

  19. Newberry, V., Yaguchi, M. & Garrett, R. A. Eur. J. Biochem. 76, 51–61 (1977).

    Article  CAS  Google Scholar 

  20. Ehresmann, C., Stiegler, P., Carbon, P., Ungewickell, E. & Garrett, R. A. Eur. J. Biochem. 103, 439–446 (1980).

    Article  CAS  Google Scholar 

  21. Dawid, I. B. & Wellauer, P. K. Cell 8, 443–448 (1976).

    Article  CAS  Google Scholar 

  22. Botchan, P., Reeder, R. H. & Dawid, I. B. Cell 11, 599–607 (1977).

    Article  CAS  Google Scholar 

  23. Sollner-Webb, B. & Reeder, R. H. Cell 18, 485–499 (1979).

    Article  CAS  Google Scholar 

  24. Boseley, P. G., Tuyns, A. & Birnstiel, M. L. Nucleic Acids Res. 5, 1121–1137 (1978).

    Article  CAS  Google Scholar 

  25. Boseley, P. G., Moss, M., Mächler, M., Portmann, R. & Birnstiel, M. L. Cell 17, 19–31 (1979).

    Article  CAS  Google Scholar 

  26. Brownlee, G. G. Determination of Sequences in RNA (North Holland, Amsterdam, 1972).

    Book  Google Scholar 

  27. Macon, J. B. & Wolfenden, R. Biochemistry 7, 3453–3458 (1968).

    Article  CAS  Google Scholar 

  28. Sutcliffe, J. G. Nucleic Acids Res. 5, 2721–2728 (1978).

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Maden, B. Methylation map of Xenopus laevis ribosomal RNA. Nature 288, 293–296 (1980). https://doi.org/10.1038/288293a0

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1038/288293a0

This article is cited by

Comments

By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing